RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 RAMP2O60895 175 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 LILRB3O75022 631 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 FGF18O76093 207 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 OR1E1P30953 314 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 SLC11A2P49281 568 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 RENBPP51606 427 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 MGAT5Q09328 741 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 HNRNPDQ14103 355 aaKnown RBP20.36■□□□□ 0.85
RTN1-202ENST00000342503 GKAP1Q5VSY0 366 aaPredicted RBP20.36■□□□□ 0.85
RTN1-202ENST00000342503 HHATQ5VTY9 493 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 LVRNQ6Q4G3 990 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 RASSF3Q86WH2 238 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 DENND1CQ8IV53 801 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 PSMG2Q969U7 264 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 APOPT1Q96IL0 206 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 KLHL5Q96PQ7 755 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 FICDQ9BVA6 458 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 IL22Q9GZX6 179 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 NSRP1Q9H0G5 558 aaKnown RBP20.36■□□□□ 0.85
RTN1-202ENST00000342503 ZBP1Q9H171 429 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.36■□□□□ 0.85
RTN1-202ENST00000342503 GKN1Q9NS71 199 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 IL1RAPL1Q9NZN1 696 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 MIA3Q5JRA6 1907 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 MAGEB16A2A368 324 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 C2orf78A6NCI8 922 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 LPXNO60711 386 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 STC2O76061 302 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 USP1O94782 785 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 ERVK-10P10266 1014 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 TAC1P20366 129 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 CA8P35219 290 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 EPHB3P54753 998 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 NAB1Q13506 487 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 SMAD1Q15797 465 aaKnown RBP20.35■□□□□ 0.85
RTN1-202ENST00000342503 PARP15Q460N3 678 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 ANKRD20A4Q4UJ75 823 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 PIGWQ7Z7B1 504 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 TMEM135Q86UB9 458 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 FIBCD1Q8N539 461 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 PABPC5Q96DU9 382 aaKnown RBP20.35■□□□□ 0.85
RTN1-202ENST00000342503 MTBPQ96DY7 904 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 CERS2Q96G23 380 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 C12orf65Q9H3J6 166 aaKnown RBP20.35■□□□□ 0.85
RTN1-202ENST00000342503 RXFP1Q9HBX9 757 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 NT5MQ9NPB1 228 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 SLC17A7Q9P2U7 560 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 SOX13Q9UN79 622 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 FAM169AQ9Y6X4 670 aa20.35■□□□□ 0.85
RTN1-202ENST00000342503 CHD5Q8TDI0 1954 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 FAM237BA0A1B0GVD1 139 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 HMX2A2RU54 273 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 TM9SF1O15321 606 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 PMPCBO75439 489 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 RFPL1O75677 317 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 OAS1P00973 400 aaKnown RBP20.34■□□□□ 0.85
RTN1-202ENST00000342503 KLKB1P03952 638 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 SPATA31D3P0C874 917 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 CORO1AP31146 461 aaKnown RBP20.34■□□□□ 0.85
RTN1-202ENST00000342503 ADRA1AP35348 466 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 ACVRL1P37023 503 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 PPP3CCP48454 512 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 NEK3P51956 506 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 YBEYP58557 167 aaPredicted RBP20.34■□□□□ 0.85
RTN1-202ENST00000342503 IL10RBQ08334 325 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 SLC10A7Q0GE19 358 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 SERINC3Q13530 473 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 MROH9Q5TGP6 573 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 MARC1Q5VT66 337 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 PACS1Q6VY07 963 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 SPATA31D4Q6ZUB0 917 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 CACNA2D3Q8IZS8 1091 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.34■□□□□ 0.85
RTN1-202ENST00000342503 ELAC2Q9BQ52 826 aaKnown RBP20.34■□□□□ 0.85
RTN1-202ENST00000342503 KLF16Q9BXK1 252 aaPredicted RBP20.34■□□□□ 0.85
RTN1-202ENST00000342503 SLC25A51Q9H1U9 297 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 CHRAC1Q9NRG0 131 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 FGFR1OP2Q9NVK5 253 aa20.34■□□□□ 0.85
RTN1-202ENST00000342503 ZFP37Q9Y6Q3 630 aaPredicted RBP20.34■□□□□ 0.85
RTN1-202ENST00000342503 ZCWPW2A0A1B0GU75 182 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 FGBP02675 491 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 LINC00271P0C7V0 271 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 IRF1P10914 325 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 HTRA4P83105 476 aaPredicted RBP20.33■□□□□ 0.85
RTN1-202ENST00000342503 FRG1Q14331 258 aaKnown RBP20.33■□□□□ 0.85
RTN1-202ENST00000342503 SEPT7Q16181 437 aaKnown RBP20.33■□□□□ 0.85
RTN1-202ENST00000342503 DENND5AQ6IQ26 1287 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 ZNF449Q6P9G9 518 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 TMEM150AQ86TG1 271 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 SPATS2Q86XZ4 545 aaKnown RBP20.33■□□□□ 0.85
RTN1-202ENST00000342503 GPR65Q8IYL9 337 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 TEX26Q8N6G2 289 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 NSMCE1Q8WV22 266 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 WBP2Q969T9 261 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 AZIN2Q96A70 460 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 MRGPRX2Q96LB1 330 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 ZNF334Q9HCZ1 680 aaPredicted RBP20.33■□□□□ 0.85
RTN1-202ENST00000342503 UXTQ9UBK9 157 aaPredicted RBP20.33■□□□□ 0.85
RTN1-202ENST00000342503 GGA2Q9UJY4 613 aa20.33■□□□□ 0.85
RTN1-202ENST00000342503 MAFFQ9ULX9 164 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms