RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 GTF2H4Q92759 462 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 NXPE3Q969Y0 559 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 CEP95Q96GE4 821 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TSNARE1Q96NA8 513 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 YME1L1Q96TA2 773 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 WDR12Q9GZL7 423 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TMEM117Q9H0C3 514 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SH3BP5O60239 455 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 NR3C1P04150 777 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ABCG1P45844 678 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 GTF2IP78347 998 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TAP1Q03518 808 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 GRM7Q14831 915 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 CCDC14Q49A88 953 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 PIGGQ5H8A4 983 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 FSCBQ5H9T9 825 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ERAP2Q6P179 960 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ZFP1Q6P2D0 407 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 CRTC3Q6UUV7 619 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 LDHAL6AQ6ZMR3 332 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ZNF438Q7Z4V0 828 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ADAMTSL2Q86TH1 951 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ZNF354CQ86Y25 554 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ARHGEF19Q8IW93 802 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 UBR7Q8N806 425 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TRPM4Q8TD43 1214 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 CFAP36Q96G28 342 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ADI1Q9BV57 179 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 INTS2Q9H0H0 1204 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ACSS3Q9H6R3 686 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 FANCFQ9NPI8 374 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SPATA6Q9NWH7 488 aaPredicted RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ADA2Q9NZK5 511 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 LMO7Q8WWI1 1683 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TRIM64BA6NI03 449 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 VWA5AO00534 786 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 DLGAP1O14490 977 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 PHGDHO43175 533 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 CSDE1O75534 798 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TOMM70O94826 608 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SNRPAP09012 282 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SNRPD2P62316 118 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ALDH6A1Q02252 535 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TRIM32Q13049 653 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ZNF267Q14586 743 aaPredicted RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 KRT79Q5XKE5 535 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 USP17L6PQ6QN14 398 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SH2D5Q6ZV89 423 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SYDE1Q6ZW31 735 aaPredicted RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 PCDH20Q8N6Y1 951 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 OR6F1Q8NGZ6 308 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ALKBH8Q96BT7 664 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC39A13Q96H72 371 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 HSFY1Q96LI6 401 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 NPAS2Q99743 824 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 VAT1LQ9HCJ6 419 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 UBE2TQ9NPD8 197 aaPredicted RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 FBXO40Q9UH90 709 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 CYB5R1Q9UHQ9 305 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TLK1Q9UKI8 766 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 CNOT6Q9ULM6 557 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 KIAA1024Q9UPX6 916 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 HEG1Q9ULI3 1381 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 ANKRD36CQ5JPF3 1778 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 CENPXA8MT69 81 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SGK1O00141 431 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 MEIS1O00470 390 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 NRP2O60462 931 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 UGT2B4P06133 528 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SOX9P48436 509 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 RCAN1P53805 252 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 PLA2G16P53816 162 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 NAPAP54920 295 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 DYNLL1P63167 89 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 TFAMQ00059 246 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 FSTL1Q12841 308 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 DUSP7Q16829 419 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC9B1Q4ZJI4 515 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 RNASEH2BQ5TBB1 312 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 STEAP3Q658P3 488 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 ZNF790Q6PG37 636 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 FRMD5Q7Z6J6 570 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SCML4Q8N228 414 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 PIWIL2Q8TC59 973 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 PCNPQ8WW12 178 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SLCO4A1Q96BD0 722 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 DACH2Q96NX9 599 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SERHL2Q9H4I8 314 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 ERVMER34-1Q9H9K5 563 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 GPRC5CQ9NQ84 441 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SIRPGQ9P1W8 387 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 ATP6V1HQ9UI12 483 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 PNMA8BQ9ULN7 279 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 PLLPQ9Y342 182 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 ATRNL1Q5VV63 1379 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 LAMB2P55268 1798 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 LRRIQ4A6NIV6 560 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 CXorf49A8MYA2 514 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms