RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 HNRNPA1L2Q32P51 320 aaKnown RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 ACCSLQ4AC99 568 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 SLC9A4Q6AI14 798 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 ARHGAP36Q6ZRI8 547 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 RFX6Q8HWS3 928 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 RCOR2Q8IZ40 523 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 PLD5Q8N7P1 536 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 ATP11CQ8NB49 1132 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 FRS2Q8WU20 508 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 HES6Q96HZ4 224 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 RBM41Q96IZ5 413 aaKnown RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 ALS2CR12Q96Q35 445 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 POLMQ9NP87 494 aaPredicted RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 hCG_1818297A0A087WSY0 165 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 USP27XA6NNY8 438 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 MIF4GDA9UHW6 222 aaKnown RBP17.07■□□□□ 0.32
SFN-201ENST00000339276 J3KR12 359 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 SYNCRIPO60506 623 aaKnown RBP17.07■□□□□ 0.32
SFN-201ENST00000339276 MAP3K6O95382 1288 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 KRT10P13645 584 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 RWDD2BP57060 319 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 DYNLT1P63172 113 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 GBE1Q04446 702 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 CAMK2GQ13555 558 aaPredicted RBP17.07■□□□□ 0.32
SFN-201ENST00000339276 DLG2Q15700 870 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 TFDP3Q5H9I0 405 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 KAZNQ674X7 775 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 ANO7Q6IWH7 933 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 UBL4BQ8N7F7 174 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 PRSS33Q8NF86 280 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 MDGA1Q8NFP4 955 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.07■□□□□ 0.32
SFN-201ENST00000339276 MAK16Q9BXY0 300 aaKnown RBP17.07■□□□□ 0.32
SFN-201ENST00000339276 SLC6A17Q9H1V8 727 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 PDFQ9HBH1 243 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 PRSS16Q9NQE7 514 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 SUN2Q9UH99 717 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 FBXO4Q9UKT5 387 aa17.07■□□□□ 0.32
SFN-201ENST00000339276 FCF1Q9Y324 198 aaKnown RBP17.07■□□□□ 0.32
SFN-201ENST00000339276 EDDM13A0A1B0GTR0 161 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 APOL1O14791 398 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 PRAMEF11O60813 436 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 SIN3BO75182 1162 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 APBB3O95704 486 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 SP9P0CG40 484 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 GABRG2P18507 467 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 CLCN6P51797 869 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 ADCY2Q08462 1091 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 HEATR6Q6AI08 1181 aaKnown RBP17.06■□□□□ 0.32
SFN-201ENST00000339276 AADACL2Q6P093 401 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 C22orf39Q6P5X5 142 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 Q6ZVU0 165 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 TRIM58Q8NG06 486 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 HMGB4Q8WW32 186 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 PTPRN2Q92932 1015 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 IPO11Q9UI26 975 aaKnown RBP17.06■□□□□ 0.32
SFN-201ENST00000339276 WDFY4Q6ZS81 3184 aa17.06■□□□□ 0.32
SFN-201ENST00000339276 CXorf51AA0A1B0GTR3 108 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 ZSCAN5CA6NGD5 496 aaPredicted RBP17.05■□□□□ 0.32
SFN-201ENST00000339276 ZNF821O75541 412 aaPredicted RBP17.05■□□□□ 0.32
SFN-201ENST00000339276 PYGMP11217 842 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 NDUFV2P19404 249 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 COPAP53621 1224 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 GEMIN4P57678 1058 aaKnown RBP17.05■□□□□ 0.32
SFN-201ENST00000339276 SLC20A2Q08357 652 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 SLC10A2Q12908 348 aaPredicted RBP17.05■□□□□ 0.32
SFN-201ENST00000339276 ZNF211Q13398 564 aaPredicted RBP17.05■□□□□ 0.32
SFN-201ENST00000339276 PPP2R5EQ16537 467 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 C9orf64Q5T6V5 341 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 MEI1Q5TIA1 1274 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 DCAF12L1Q5VU92 463 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 NPNTQ6UXI9 565 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 CACUL1Q86Y37 369 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 ATPAF2Q8N5M1 289 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 CAMKK1Q8N5S9 505 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 HERPUD2Q9BSE4 406 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 HEMGNQ9BXL5 484 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 MKRN2Q9H000 416 aaKnown RBP17.05■□□□□ 0.32
SFN-201ENST00000339276 TNKS2Q9H2K2 1166 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 SP110Q9HB58 689 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 DTLQ9NZJ0 730 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 BCCIPQ9P287 314 aaKnown RBP eCLIP17.05■□□□□ 0.32
SFN-201ENST00000339276 SHROOM3Q8TF72 1996 aa17.05■□□□□ 0.32
SFN-201ENST00000339276 TARSL2A2RTX5 802 aaKnown RBP17.04■□□□□ 0.32
SFN-201ENST00000339276 H0Y858 1186 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 BNIP3LO60238 219 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 CST8O60676 142 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 ALDH1A2O94788 518 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 TMCC1O94876 653 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 ZFXP17010 805 aaPredicted RBP17.04■□□□□ 0.32
SFN-201ENST00000339276 HOXA6P31267 233 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 FNTBP49356 437 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 COPS2P61201 443 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 IL10RBQ08334 325 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 GALNT2Q10471 571 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 TCF15Q12870 199 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 TFDP2Q14188 446 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 STK40Q8N2I9 435 aa17.04■□□□□ 0.32
SFN-201ENST00000339276 OR2T3Q8NH03 318 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms