RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 MMAAQ8IVH4 418 aaKnown RBP14.32□□□□□ -0.12
LIMS1-201ENST00000332345 UMODL1-AS1Q8N2C9 162 aa14.32□□□□□ -0.12
LIMS1-201ENST00000332345 GANCQ8TET4 914 aa14.32□□□□□ -0.12
LIMS1-201ENST00000332345 OR8D1Q8WZ84 308 aa14.32□□□□□ -0.12
LIMS1-201ENST00000332345 HSPH1Q92598 858 aa14.32□□□□□ -0.12
LIMS1-201ENST00000332345 FOXJ1Q92949 421 aa14.32□□□□□ -0.12
LIMS1-201ENST00000332345 TOE1Q96GM8 510 aaKnown RBP14.32□□□□□ -0.12
LIMS1-201ENST00000332345 KCTD15Q96SI1 283 aaPredicted RBP14.32□□□□□ -0.12
LIMS1-201ENST00000332345 CEP44Q9C0F1 390 aa14.32□□□□□ -0.12
LIMS1-201ENST00000332345 WSB2Q9NYS7 404 aaPredicted RBP14.32□□□□□ -0.12
LIMS1-201ENST00000332345 FRYLO94915 3013 aa14.32□□□□□ -0.12
LIMS1-201ENST00000332345 BCLAF3A2AJT9 711 aaKnown RBP14.31□□□□□ -0.12
LIMS1-201ENST00000332345 GOLGA6L6A8MZA4 724 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 H3BRJ5 948 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 MCF2LO15068 1137 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 ALOX15BO15296 676 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 LCA5LO95447 670 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 ADH1BP00325 375 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 IL1BP01584 269 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 RARAP10276 462 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 GOT1P17174 413 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 ERCC2P18074 760 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 C5AR1P21730 350 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 SLC8A1P32418 973 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 SERPINH1P50454 418 aaKnown RBP14.31□□□□□ -0.12
LIMS1-201ENST00000332345 NDST2P52849 883 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 SPEM2Q0P670 501 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 MESDQ14696 234 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 CSRP2Q16527 193 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 DPYSL2Q16555 572 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 SMTNL2Q2TAL5 461 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 SYCP2LQ5T4T6 812 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 USP30Q70CQ3 517 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 CACUL1Q86Y37 369 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 LZTR1Q8N653 840 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
LIMS1-201ENST00000332345 CADM4Q8NFZ8 388 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 RFFLQ8WZ73 363 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 ZNF419Q96HQ0 510 aaPredicted RBP14.31□□□□□ -0.12
LIMS1-201ENST00000332345 OMDQ99983 421 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 BTBD1Q9H0C5 482 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 PABPC3Q9H361 631 aaKnown RBP14.31□□□□□ -0.12
LIMS1-201ENST00000332345 SGK2Q9HBY8 427 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 OSGEPQ9NPF4 335 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.31□□□□□ -0.12
LIMS1-201ENST00000332345 FBXL12Q9NXK8 326 aa14.31□□□□□ -0.12
LIMS1-201ENST00000332345 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
LIMS1-201ENST00000332345 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
LIMS1-201ENST00000332345 ARHGAP42A6NI28 874 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 RASA4BC9J798 803 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 K7ERQ8 282 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 MID1O15344 667 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 RASA4O43374 803 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 SMAD6O43541 496 aaKnown RBP14.3□□□□□ -0.12
LIMS1-201ENST00000332345 BUB1O43683 1085 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 BNIP3LO60238 219 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 MTA2O94776 668 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 IPO7O95373 1038 aaKnown RBP14.3□□□□□ -0.12
LIMS1-201ENST00000332345 KRT7P08729 469 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 VAV1P15498 845 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 TCF4P15884 667 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 MAN1A1P33908 653 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 ARF5P84085 180 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 SLC25A11Q02978 314 aaKnown RBP14.3□□□□□ -0.12
LIMS1-201ENST00000332345 ZNF33AQ06730 810 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 SERINC3Q13530 473 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 KRT81Q14533 505 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 TCEAL1Q15170 157 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 LYSMD4Q5XG99 296 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 Q6ZVU0 165 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 CYP2U1Q7Z449 544 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 POLNQ7Z5Q5 900 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 FAM124AQ86V42 546 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 MAP7D3Q8IWC1 876 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 PLPP6Q8IY26 295 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 DEFB119Q8N690 84 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 PCDH20Q8N6Y1 951 aaKnown RBP14.3□□□□□ -0.12
LIMS1-201ENST00000332345 CASKIN2Q8WXE0 1202 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 ISG20Q96AZ6 181 aaKnown RBP14.3□□□□□ -0.12
LIMS1-201ENST00000332345 GPR174Q9BXC1 333 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 PCED1AQ9H1Q7 454 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 NOL6Q9H6R4 1146 aaKnown RBP14.3□□□□□ -0.12
LIMS1-201ENST00000332345 CD93Q9NPY3 652 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 VPS45Q9NRW7 570 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 SEMA4GQ9NTN9 838 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 PPM1HQ9ULR3 514 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 PCDHA13Q9Y5I0 950 aa14.3□□□□□ -0.12
LIMS1-201ENST00000332345 TMEM110-MUSTN1A8MSY1 372 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 C1QTNF3-AMACRE9PGA6 284 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 NDUFA10O95299 355 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 ZNF806P0C7X5 589 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 FECHP22830 423 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 MPLP40238 635 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 PTGER3P43115 390 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 NOP2P46087 812 aaKnown RBP14.29□□□□□ -0.12
LIMS1-201ENST00000332345 PSMD8P48556 350 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 DNA2P51530 1060 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 CDH6P55285 790 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 CCDC15Q0P6D6 951 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 INO80DQ53TQ3 878 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms