RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 SLC12A6Q9UHW9 1150 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 GGA2Q9UJY4 613 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 PAXBP1Q9Y5B6 917 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 TRIOO75962 3097 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 IGHV1OR15-9A0A0B4J2B8 117 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 A0A1B0GVM2 712 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 TCAF2A6NFQ2 919 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 KCNU1A8MYU2 1149 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 F8VZ95 297 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 FOXN3O00409 490 aaPredicted RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 MSI1O43347 362 aaKnown RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 SYNCRIPO60506 623 aaKnown RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 F9P00740 461 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 SRPRAP08240 638 aaKnown RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 CYP11B1P15538 503 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 BCKDHBP21953 392 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 SLC6A4P31645 630 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 CCR1P32246 355 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 MATKP42679 507 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 SLC6A3Q01959 620 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 SULT2A1Q06520 285 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 LPAL2Q16609 132 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 ARHGAP44Q17R89 818 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 AASDHQ4L235 1098 aaPredicted RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 FKBP15Q5T1M5 1219 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 LYSMD4Q5XG99 296 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 TMEM215Q68D42 235 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 ANKRD34AQ69YU3 496 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 NADSYN1Q6IA69 706 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 PPP1R2P3Q6NXS1 205 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 GJB7Q6PEY0 223 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 SASS6Q6UVJ0 657 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 CHST9Q7L1S5 443 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 TAC4Q86UU9 113 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 ADIPOR2Q86V24 386 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 CCDC117Q8IWD4 279 aaPredicted RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 NDRG1Q92597 394 aaKnown RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 PMEPA1Q969W9 287 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 ZNF419Q96HQ0 510 aaPredicted RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 PRICKLE1Q96MT3 831 aaPredicted RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 ACOX2Q99424 681 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 PRMT1Q99873 361 aaKnown RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 BPIFA3Q9BQP9 254 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 GANQ9H2C0 597 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 SAMSN1Q9NSI8 373 aaKnown RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 PLK2Q9NYY3 685 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 CALCOCO1Q9P1Z2 691 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 SUN2Q9UH99 717 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 LIMA1Q9UHB6 759 aaKnown RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 MBD1Q9UIS9 605 aaPredicted RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 PILRBQ9UKJ0 227 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 STAP1Q9ULZ2 295 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 MYO6Q9UM54 1294 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 PLA2G4CQ9UP65 541 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 FHOD1Q9Y613 1164 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.54□□□□□ -1.36
SMG1-201ENST00000330588 RALGAPA1Q6GYQ0 2036 aa6.54□□□□□ -1.36
SMG1-201ENST00000330588 NUP205Q92621 2012 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 TARSL2A2RTX5 802 aaKnown RBP6.53□□□□□ -1.36
SMG1-201ENST00000330588 LGALS16A8MUM7 142 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 F5H5T6 163 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 TRIM24O15164 1050 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 TBL1XO60907 577 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 LUC7L3O95232 432 aaKnown RBP6.53□□□□□ -1.36
SMG1-201ENST00000330588 MOCS3O95396 460 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 SERPINF2P08697 491 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 EDN3P14138 238 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 ZNF18P17022 549 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 CSRP1P21291 193 aaKnown RBP6.53□□□□□ -1.36
SMG1-201ENST00000330588 ABCB4P21439 1286 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 TACR2P21452 398 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 CD6P30203 668 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 USP8P40818 1118 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 IL12RB1P42701 662 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 COPAP53621 1224 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 JAM2P57087 298 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 ARID5AQ03989 594 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 KRT31Q15323 416 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 DUOXA1Q1HG43 343 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 FUT11Q495W5 492 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 PTPN20Q4JDL3 420 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 DCAF6Q58WW2 860 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 RABGAP1LQ5R372 815 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 SYCP2LQ5T4T6 812 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 SYPL2Q5VXT5 272 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 MBLAC2Q68D91 279 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 IL31Q6EBC2 164 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 KIAA1211LQ6NV74 962 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 SERPINA13PQ6UXR4 307 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 USP30Q70CQ3 517 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 BNIPLQ7Z465 357 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 SLC47A2Q86VL8 602 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 MFN1Q8IWA4 741 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 OR2T3Q8NH03 318 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 DNASE2BQ8WZ79 361 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 PRCCQ92733 491 aaPredicted RBP6.53□□□□□ -1.36
SMG1-201ENST00000330588 C1orf74Q96LT6 269 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 NPY6RQ99463 290 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 NUSAP1Q9BXS6 441 aaKnown RBP6.53□□□□□ -1.36
SMG1-201ENST00000330588 ZDHHC5Q9C0B5 715 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms