RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 USP1O94782 785 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 MT-CYBP00156 380 aaPredicted RBP15.21■□□□□ 0.02
TPM3-205ENST00000328159 TPH1P17752 444 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 ELF1P32519 619 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 SLC11A2P49281 568 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 HARS2P49590 506 aaKnown RBP15.21■□□□□ 0.02
TPM3-205ENST00000328159 TWF1Q12792 350 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 POLD3Q15054 466 aaPredicted RBP15.21■□□□□ 0.02
TPM3-205ENST00000328159 PDK4Q16654 411 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 PARP15Q460N3 678 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 OTOP2Q7RTS6 562 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 RASSF3Q86WH2 238 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 CCDC197Q8NCU1 140 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 IPMKQ8NFU5 416 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 PLD4Q96BZ4 506 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 FICDQ9BVA6 458 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 SLC17A7Q9P2U7 560 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 SLC17A6Q9P2U8 582 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 SOX13Q9UN79 622 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 FAM169AQ9Y6X4 670 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 HMX2A2RU54 273 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 RFPL1O75677 317 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 ADRA1DP25100 572 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 OR1E1P30953 314 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 SLC6A4P31645 630 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 ADRA1AP35348 466 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 CCNFP41002 786 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 RENBPP51606 427 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 YBEYP58557 167 aaPredicted RBP15.2■□□□□ 0.02
TPM3-205ENST00000328159 ANKRD20A4Q4UJ75 823 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 FAM133BQ5BKY9 247 aaKnown RBP15.2■□□□□ 0.02
TPM3-205ENST00000328159 MROH9Q5TGP6 573 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 C6orf89Q6UWU4 347 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 PACS1Q6VY07 963 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 RGS9BPQ6ZS82 235 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 ZNF354CQ86Y25 554 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 GPR65Q8IYL9 337 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 TCEAL8Q8IYN2 117 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 CABS1Q96KC9 395 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 PCDHB12Q9Y5F1 795 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 INSL5Q9Y5Q6 135 aa15.2■□□□□ 0.02
TPM3-205ENST00000328159 ATXN2Q99700 1313 aaKnown RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 ZCWPW2A0A1B0GU75 182 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 COPEO14579 308 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 ERVK-10P10266 1014 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 ALADP13716 330 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 PPP3CCP48454 512 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 EPHB3P54753 998 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 IL10RBQ08334 325 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 SLC10A7Q0GE19 358 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 SERINC3Q13530 473 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 ZKSCAN8Q15776 578 aaPredicted RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 MARC1Q5VT66 337 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 RFWD3Q6PCD5 774 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 TIFABQ6ZNK6 161 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 DNAJB7Q7Z6W7 309 aaPredicted RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 DENND1CQ8IV53 801 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 CFAP52Q8N1V2 620 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 NSMCE1Q8WV22 266 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 PSMG2Q969U7 264 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 AZIN2Q96A70 460 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 PABPC5Q96DU9 382 aaKnown RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 KLHL5Q96PQ7 755 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 SLC25A51Q9H1U9 297 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 C12orf65Q9H3J6 166 aaKnown RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 NT5MQ9NPB1 228 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.19■□□□□ 0.02
TPM3-205ENST00000328159 ZFATQ9P243 1243 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 MAFFQ9ULX9 164 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 CHD5Q8TDI0 1954 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 ZBBXA8MT70 800 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 TEX28O15482 410 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 SNX3O60493 162 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 LILRB3O75022 631 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 PMPCBO75439 489 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 STC2O76061 302 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 OAS1P00973 400 aaKnown RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 CREMQ03060 361 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 TNK2Q07912 1038 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 IFT88Q13099 833 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 DNAJC3Q13217 504 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 MPP3Q13368 585 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 DENND5AQ6IQ26 1287 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 TEX26Q8N6G2 289 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 LRRC8CQ8TDW0 803 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 IMP4Q96G21 291 aaKnown RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 MRGPRX2Q96LB1 330 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 KIFC1Q9BW19 673 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 KLF16Q9BXK1 252 aaPredicted RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 RETREG1Q9H6L5 497 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 RXFP1Q9HBX9 757 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 ENTPD7Q9NQZ7 604 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 CHRAC1Q9NRG0 131 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 MKS1Q9NXB0 559 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 IL1RAPL1Q9NZN1 696 aa15.19■□□□□ 0.02
TPM3-205ENST00000328159 UXTQ9UBK9 157 aaPredicted RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 RRP15Q9Y3B9 282 aaKnown RBP15.19■□□□□ 0.02
TPM3-205ENST00000328159 PSAT1Q9Y617 370 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms