RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 ARL15Q9NXU5 204 aa21.32■■□□□ 1
RNF40-201ENST00000324685 DYTNA2CJ06 578 aa21.32■■□□□ 1
RNF40-201ENST00000324685 OR6B1O95007 311 aa21.32■■□□□ 1
RNF40-201ENST00000324685 CYP2C18P33260 490 aa21.32■■□□□ 1
RNF40-201ENST00000324685 USP45Q70EL2 814 aa21.32■■□□□ 1
RNF40-201ENST00000324685 UBE2E3Q969T4 207 aa21.32■■□□□ 1
RNF40-201ENST00000324685 ABCC13Q9NSE7 274 aa21.32■■□□□ 1
RNF40-201ENST00000324685 SNX6Q9UNH7 406 aa21.32■■□□□ 1
RNF40-201ENST00000324685 MTF2Q9Y483 593 aaPredicted RBP21.32■■□□□ 1
RNF40-201ENST00000324685 ECDO95905 644 aaPredicted RBP21.32■■□□□ 1
RNF40-201ENST00000324685 AKAP5P24588 427 aa21.32■■□□□ 1
RNF40-201ENST00000324685 TTC23Q5W5X9 447 aa21.32■■□□□ 1
RNF40-201ENST00000324685 SLC16A10Q8TF71 515 aa21.32■■□□□ 1
RNF40-201ENST00000324685 S100A13Q99584 98 aa21.32■■□□□ 1
RNF40-201ENST00000324685 MRPL9Q9BYD2 267 aaKnown RBP21.32■■□□□ 1
RNF40-201ENST00000324685 AGXT2Q9BYV1 514 aa21.32■■□□□ 1
RNF40-201ENST00000324685 CHST7Q9NS84 486 aa21.32■■□□□ 1
RNF40-201ENST00000324685 CORO2BQ9UQ03 480 aa21.32■■□□□ 1
RNF40-201ENST00000324685 AP5Z1O43299 807 aa21.32■■□□□ 1
RNF40-201ENST00000324685 PKNOX1P55347 436 aa21.32■■□□□ 1
RNF40-201ENST00000324685 EIF3MQ7L2H7 374 aaKnown RBP21.32■■□□□ 1
RNF40-201ENST00000324685 FAM20CQ8IXL6 584 aa21.32■■□□□ 1
RNF40-201ENST00000324685 DNAJB3Q8WWF6 145 aa21.32■■□□□ 1
RNF40-201ENST00000324685 GRIP2Q9C0E4 1043 aa21.32■■□□□ 1
RNF40-201ENST00000324685 SEMA4BQ9NPR2 832 aaPredicted RBP21.32■■□□□ 1
RNF40-201ENST00000324685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.32■■□□□ 1
RNF40-201ENST00000324685 RNASE11Q8TAA1 199 aaKnown RBP21.32■■□□□ 1
RNF40-201ENST00000324685 PYDC1Q8WXC3 89 aa21.32■■□□□ 1
RNF40-201ENST00000324685 TBCDQ9BTW9 1192 aa21.32■■□□□ 1
RNF40-201ENST00000324685 KCNQ5Q9NR82 932 aa21.32■■□□□ 1
RNF40-201ENST00000324685 EHD3Q9NZN3 535 aa21.32■■□□□ 1
RNF40-201ENST00000324685 NFASCO94856 1347 aa21.31■■□□□ 1
RNF40-201ENST00000324685 KCNK1O00180 336 aa21.31■■□□□ 1
RNF40-201ENST00000324685 ENO2P09104 434 aaPredicted RBP21.31■■□□□ 1
RNF40-201ENST00000324685 DGCR6LQ9BY27 220 aa21.31■■□□□ 1
RNF40-201ENST00000324685 RNPEPL1Q9HAU8 725 aa21.31■■□□□ 1
RNF40-201ENST00000324685 ZNF24P17028 368 aa21.31■■□□□ 1
RNF40-201ENST00000324685 SLC12A3P55017 1021 aa21.31■■□□□ 1
RNF40-201ENST00000324685 SPIDRQ14159 915 aa21.31■■□□□ 1
RNF40-201ENST00000324685 BROXQ5VW32 411 aa21.31■■□□□ 1
RNF40-201ENST00000324685 YTHDF3Q7Z739 585 aaKnown RBP21.31■■□□□ 1
RNF40-201ENST00000324685 CLYBLQ8N0X4 340 aa21.31■■□□□ 1
RNF40-201ENST00000324685 SAE1Q9UBE0 346 aaPredicted RBP21.31■■□□□ 1
RNF40-201ENST00000324685 A0A0A0MRY4 1105 aa21.31■■□□□ 1
RNF40-201ENST00000324685 ABHD2P08910 425 aa21.31■■□□□ 1
RNF40-201ENST00000324685 PSMD4P55036 377 aaKnown RBP21.31■■□□□ 1
RNF40-201ENST00000324685 TAF5Q15542 800 aa21.31■■□□□ 1
RNF40-201ENST00000324685 PIWIL2Q8TC59 973 aaKnown RBP21.31■■□□□ 1
RNF40-201ENST00000324685 Q96MT0 163 aa21.31■■□□□ 1
RNF40-201ENST00000324685 SPATA13Q96N96 652 aa21.31■■□□□ 1
RNF40-201ENST00000324685 KIAA1683Q9H0B3 1180 aa21.31■■□□□ 1
RNF40-201ENST00000324685 GNPTGQ9UJJ9 305 aa21.31■■□□□ 1
RNF40-201ENST00000324685 PCDHGC5Q9Y5F6 944 aa21.31■■□□□ 1
RNF40-201ENST00000324685 TEX28O15482 410 aa21.31■■□□□ 1
RNF40-201ENST00000324685 SGTAO43765 313 aa21.31■■□□□ 1
RNF40-201ENST00000324685 MFSD10Q14728 455 aa21.31■■□□□ 1
RNF40-201ENST00000324685 INTS5Q6P9B9 1019 aaKnown RBP21.31■■□□□ 1
RNF40-201ENST00000324685 FUKQ8N0W3 1084 aa21.31■■□□□ 1
RNF40-201ENST00000324685 ZNF655Q8N720 491 aaPredicted RBP21.31■■□□□ 1
RNF40-201ENST00000324685 ZNF398Q8TD17 642 aa21.31■■□□□ 1
RNF40-201ENST00000324685 NUDT14O95848 222 aa21.3■■□□□ 1
RNF40-201ENST00000324685 PPATQ06203 517 aa21.3■■□□□ 1
RNF40-201ENST00000324685 NEPROQ6NW34 567 aa21.3■■□□□ 1
RNF40-201ENST00000324685 PEG10Q86TG7 708 aaKnown RBP21.3■■□□□ 1
RNF40-201ENST00000324685 CAMKK1Q8N5S9 505 aa21.3■■□□□ 1
RNF40-201ENST00000324685 DDTLA6NHG4 134 aaPredicted RBP21.3■■□□□ 1
RNF40-201ENST00000324685 E5RJQ4 531 aa21.3■■□□□ 1
RNF40-201ENST00000324685 ANXA5P08758 320 aa21.3■■□□□ 1
RNF40-201ENST00000324685 CCDC130P13994 396 aa21.3■■□□□ 1
RNF40-201ENST00000324685 IL1R1P14778 569 aa21.3■■□□□ 1
RNF40-201ENST00000324685 SERPINA4P29622 427 aa21.3■■□□□ 1
RNF40-201ENST00000324685 MAPK9P45984 424 aa21.3■■□□□ 1
RNF40-201ENST00000324685 WDR59Q6PJI9 974 aa21.3■■□□□ 1
RNF40-201ENST00000324685 MYDGFQ969H8 173 aa21.3■■□□□ 1
RNF40-201ENST00000324685 C1QTNF7Q9BXJ2 289 aa21.3■■□□□ 1
RNF40-201ENST00000324685 CLN6Q9NWW5 311 aa21.3■■□□□ 1
RNF40-201ENST00000324685 SIK3Q9Y2K2 1263 aa21.3■■□□□ 1
RNF40-201ENST00000324685 SPATA31A5Q5VU36 1347 aa21.3■■□□□ 1
RNF40-201ENST00000324685 SPATA31A7Q8IWB4 1347 aa21.3■■□□□ 1
RNF40-201ENST00000324685 MAPKAPK2P49137 400 aa21.3■■□□□ 1
RNF40-201ENST00000324685 FAM171A1Q5VUB5 890 aa21.3■■□□□ 1
RNF40-201ENST00000324685 PIGUQ9H490 435 aa21.3■■□□□ 1
RNF40-201ENST00000324685 LEF1Q9UJU2 399 aaPredicted RBP21.3■■□□□ 1
RNF40-201ENST00000324685 BTBD3Q9Y2F9 522 aa21.3■■□□□ 1
RNF40-201ENST00000324685 CCDC189A1A4V9 331 aa21.3■■□□□ 1
RNF40-201ENST00000324685 ANKDD1BA6NHY2 528 aa21.3■■□□□ 1
RNF40-201ENST00000324685 SETMARQ53H47 684 aaPredicted RBP21.3■■□□□ 1
RNF40-201ENST00000324685 LRRC38Q5VT99 294 aa21.3■■□□□ 1
RNF40-201ENST00000324685 IRAK1BP1Q5VVH5 260 aa21.3■■□□□ 1
RNF40-201ENST00000324685 PCDH20Q8N6Y1 951 aaKnown RBP21.3■■□□□ 1
RNF40-201ENST00000324685 FBXO30Q8TB52 745 aa21.3■■□□□ 1
RNF40-201ENST00000324685 CYP1A2P05177 515 aa21.3■■□□□ 1
RNF40-201ENST00000324685 CLCN5P51795 746 aa21.3■■□□□ 1
RNF40-201ENST00000324685 PLK1P53350 603 aa21.3■■□□□ 1
RNF40-201ENST00000324685 OR52L1Q8NGH7 329 aa21.3■■□□□ 1
RNF40-201ENST00000324685 FAM86B1E9PN63 330 aa21.29■■□□□ 1
RNF40-201ENST00000324685 MLYCDO95822 493 aa21.29■■□□□ 1
RNF40-201ENST00000324685 SNRPB2P08579 225 aaKnown RBP21.29■■□□□ 1
RNF40-201ENST00000324685 FAM86B2P0C5J1 330 aa21.29■■□□□ 1
RNF40-201ENST00000324685 CRATP43155 626 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms