RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 SLC44A3Q8N4M1 653 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 ZSCAN18Q8TBC5 510 aaPredicted RBP18.42■□□□□ 0.54
SYNE4-201ENST00000324444 DDI1Q8WTU0 396 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 FGF13Q92913 245 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 WBP2Q969T9 261 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 EXOC4Q96A65 974 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 SP110Q9HB58 689 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 ZDHHC18Q9NUE0 388 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 KLHL8Q9P2G9 620 aaPredicted RBP18.42■□□□□ 0.54
SYNE4-201ENST00000324444 ZNF212Q9UDV6 495 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 FBXL21Q9UKT6 434 aa18.42■□□□□ 0.54
SYNE4-201ENST00000324444 CACNA1HO95180 2353 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 DOCK4Q8N1I0 1966 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 MAFKO60675 156 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 TBL1XO60907 577 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 ZSCAN5DPP0CG00 497 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 CCNB1P14635 433 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 RPS24P62847 133 aaKnown RBP18.41■□□□□ 0.54
SYNE4-201ENST00000324444 BASP1P80723 227 aaKnown RBP18.41■□□□□ 0.54
SYNE4-201ENST00000324444 HTR4Q13639 388 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 RFTN1Q14699 578 aaPredicted RBP18.41■□□□□ 0.54
SYNE4-201ENST00000324444 ZNF77Q15935 545 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 SPDYCQ5MJ68 293 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 PID1Q7Z2X4 250 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 BBS7Q8IWZ6 715 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 CFAP52Q8N1V2 620 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 RIN3Q8TB24 985 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 SMARCD2Q92925 531 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 PKNOX2Q96KN3 472 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 PRICKLE1Q96MT3 831 aaPredicted RBP18.41■□□□□ 0.54
SYNE4-201ENST00000324444 PRRX2Q99811 253 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 HINFPQ9BQA5 517 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 TRPV4Q9HBA0 871 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 RAB6BQ9NRW1 208 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 THG1LQ9NWX6 298 aaKnown RBP18.41■□□□□ 0.54
SYNE4-201ENST00000324444 SEPT10Q9P0V9 454 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 CCL26Q9Y258 94 aa18.41■□□□□ 0.54
SYNE4-201ENST00000324444 CXorf51AA0A1B0GTR3 108 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 ERI2A8K979 691 aaKnown RBP18.4■□□□□ 0.54
SYNE4-201ENST00000324444 E7EVH7 732 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 ANHXE9PGG2 379 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 AP3B1O00203 1094 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 TSPAN3O60637 253 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 LUC7L3O95232 432 aaKnown RBP18.4■□□□□ 0.54
SYNE4-201ENST00000324444 ETS1P14921 441 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 VAV1P15498 845 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 MAGEA6P43360 314 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 SERINC3Q13530 473 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 CDH18Q13634 790 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 BEND6Q5SZJ8 279 aaPredicted RBP18.4■□□□□ 0.54
SYNE4-201ENST00000324444 MTSS1LQ765P7 747 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 HDXQ7Z353 690 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 FBXO25Q8TCJ0 367 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 MAML1Q92585 1016 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 ARHGEF2Q92974 986 aaKnown RBP18.4■□□□□ 0.54
SYNE4-201ENST00000324444 HMCESQ96FZ2 354 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 ACBD3Q9H3P7 528 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 C10orf88Q9H8K7 445 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 NDFIP2Q9NV92 336 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 NUMBLQ9Y6R0 609 aa18.4■□□□□ 0.54
SYNE4-201ENST00000324444 EIF3HO15372 352 aaKnown RBP eCLIP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 PTPN3P26045 913 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 HOXD11P31277 338 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 TNNT3P45378 269 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 LMAN1P49257 510 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 PTPN5P54829 565 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 GEMIN4P57678 1058 aaKnown RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 WASHC5Q12768 1159 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 RNASEH2BQ5TBB1 312 aaKnown RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 MARC1Q5VT66 337 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 IL31Q6EBC2 164 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 ASTLQ6HA08 431 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 ZDHHC24Q6UX98 284 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 METTL3Q86U44 580 aaKnown RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 SIX5Q8N196 739 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 ZCCHC9Q8N567 271 aaKnown RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 TMEM105Q8N8V8 129 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 GLIS1Q8NBF1 620 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 TTC16Q8NEE8 873 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 FLCNQ8NFG4 579 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 CCDC110Q8TBZ0 833 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 TEKT5Q96M29 485 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 ASB16Q96NS5 453 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 IL12RB2Q99665 862 aa18.39■□□□□ 0.53
SYNE4-201ENST00000324444 SMG9Q9H0W8 520 aaKnown RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 NOL6Q9H6R4 1146 aaKnown RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 EIF2B3Q9NR50 452 aaKnown RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 KIAA1522Q9P206 1035 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 FARP1Q9Y4F1 1045 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-201ENST00000324444 KCNK1O00180 336 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 KDELR3O43731 214 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 PPFIA2O75334 1257 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 SRFP11831 508 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 TPSB2P20231 275 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 ECHS1P30084 290 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 IFNAR2P48551 515 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 IRAK1P51617 712 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 ARL4CP56559 192 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 TNK2Q07912 1038 aa18.38■□□□□ 0.53
SYNE4-201ENST00000324444 TCF15Q12870 199 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms