RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 GULP1Q9UBP9 304 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 A0A0A6YYK5 440 aaPredicted RBP8.96□□□□□ -0.98
SSBP2-201ENST00000320672 GSAPA4D1B5 854 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 ACRP10323 421 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 PTPN1P18031 435 aaKnown RBP8.96□□□□□ -0.98
SSBP2-201ENST00000320672 BMP6P22004 513 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 MAP3K10Q02779 954 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 LPIN1Q14693 890 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 CCNG2Q16589 344 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 OTOP2Q7RTS6 562 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 DHFR2Q86XF0 187 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 LNX2Q8N448 690 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 ATAD1Q8NBU5 361 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 OR6Y1Q8NGX8 325 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 SIKE1Q9BRV8 207 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 ZNF446Q9NWS9 450 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 OR12D3Q9UGF7 316 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 CD48P09326 243 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 MAT2AP31153 395 aaKnown RBP8.96□□□□□ -0.98
SSBP2-201ENST00000320672 PPM1JQ5JR12 505 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 PAPD7Q5XG87 772 aaKnown RBP8.96□□□□□ -0.98
SSBP2-201ENST00000320672 UGT3A1Q6NUS8 523 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 FBXL19Q6PCT2 694 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 RASAL3Q86YV0 1011 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 DDHD1Q8NEL9 900 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 PPP2R3CQ969Q6 453 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 MBOAT7Q96N66 472 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 FERD3LQ96RJ6 166 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 PCDHB12Q9Y5F1 795 aa8.96□□□□□ -0.98
SSBP2-201ENST00000320672 H7C4K7 107 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 PSIP1O75475 530 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CTSEP14091 401 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 ITGADQ13349 1161 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 TSC22D1Q15714 1073 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 KLHL12Q53G59 568 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 PITRM1Q5JRX3 1037 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 ZNF677Q86XU0 584 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 INVSQ9Y283 1065 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 NEXMIFQ5QGS0 1516 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 ALKQ9UM73 1620 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 GRIN3BO60391 1043 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 VIL1P09327 827 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 KDELR1P24390 212 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 AGBL3Q8NEM8 1001 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 FAM110BQ8TC76 370 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 NSMCE2Q96MF7 247 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 ERVK-5Q9HDB9 667 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SALL1Q9NSC2 1324 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 ISM1B1AKI9 464 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 PSMD9O00233 223 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SMAD9O15198 467 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 RNASEH1O60930 286 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CACTIN-AS1Q8N1I8 211 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 AUTS2Q8WXX7 1259 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 RIOX1Q9H6W3 641 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 FAM149AA5PLN7 773 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SERPINF2P08697 491 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 AMD1P17707 334 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SLC6A3Q01959 620 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 KLF1Q13351 362 aaPredicted RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CDKAL1Q5VV42 579 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 POTEAQ6S8J7 498 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 PIGZQ86VD9 579 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 QKIQ96PU8 341 aaKnown RBP eCLIP8.95□□□□□ -0.981e-7■■■■■ 29.5
SSBP2-201ENST00000320672 UBE2OQ9C0C9 1292 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 MFSD1Q9H3U5 465 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 VIPAS39Q9H9C1 493 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 ABCB9Q9NP78 766 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 KIAA0391O15091 583 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CLTBP09497 229 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SMIM10L2AP0DMW4 78 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SMIM10L2BP0DMW5 78 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 ITGA3P26006 1051 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 GTF2E2P29084 291 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CAPSQ13938 189 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 PSMD5Q16401 504 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SETMARQ53H47 684 aaPredicted RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SLC27A1Q6PCB7 646 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 GK5Q6ZS86 529 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 UBXN6Q9BZV1 441 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 MRPL17Q9NRX2 175 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CEP170BQ9Y4F5 1589 aaPredicted RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 SHOX2O60902 331 aaPredicted RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 HDCP19113 662 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CTNNB1P35222 781 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 EIF2B2P49770 351 aaKnown RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 UAP1L1Q3KQV9 507 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 C10orf107Q8IVU9 208 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CERS2Q96G23 380 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 HIC2Q96JB3 615 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 NMRAL1Q9HBL8 299 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 UBA2Q9UBT2 640 aaPredicted RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 JCADQ9P266 1359 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 CYP4F8P98187 520 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 PTSQ03393 145 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 PHKG1Q16816 387 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 ARMC12Q5T9G4 340 aa8.95□□□□□ -0.98
SSBP2-201ENST00000320672 TIGD7Q6NT04 549 aaPredicted RBP8.95□□□□□ -0.98
SSBP2-201ENST00000320672 HIPK1Q86Z02 1210 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms