RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CFAP73A6NFT4 308 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 CACNG3O60359 315 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ANXA9O76027 345 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 CNTN5O94779 1100 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 UPP2O95045 317 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 TGDSO95455 350 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 HLA-DQB2P05538 268 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 BPGMP07738 259 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 KITP10721 976 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 MYL2P10916 166 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 SPRP35270 261 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 ELF3P78545 371 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 GPR17Q13304 367 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ALFQ53S48 1182 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 RASIP1Q5U651 963 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 TIGD7Q6NT04 549 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 MSANTD2Q6P1R3 559 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 FBXO46Q6PJ61 603 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 PRSS55Q6UWB4 352 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 KYAT3Q6YP21 454 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 TRIM42Q8IWZ5 723 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 DCLK2Q8N568 766 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 PPP1R14CQ8TAE6 165 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ZNF398Q8TD17 642 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 GIPC2Q8TF65 315 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 DEFB118Q96PH6 123 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 TMEM237Q96Q45 408 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 IL12RB2Q99665 862 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 RBBP8Q99708 897 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 FSD1LQ9BXM9 530 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 C20orf27Q9GZN8 174 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 UNC93B1Q9H1C4 597 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 NOL6Q9H6R4 1146 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 KCNK13Q9HB14 408 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 TLR8Q9NR97 1041 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 IARS2Q9NSE4 1012 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.7□□□□□ -1.18
IFT88-201ENST00000319980 ZNF358Q9NW07 568 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 HEY2Q9UBP5 337 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 MARCOQ9UEW3 520 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 DCDC2Q9UHG0 476 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ZFP69BQ9UJL9 534 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 HAO1Q9UJM8 370 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 SOX13Q9UN79 622 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 STK38LQ9Y2H1 464 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 SSUH2Q9Y2M2 353 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 SLC12A8A0AV02 714 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 FAM92AA1XBS5 289 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 AP3B1O00203 1094 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 GPR37O15354 613 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 GLRA3O75311 464 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 CBX6O95503 412 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 CHRM1P11229 460 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 NQO1P15559 274 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 SERPINB3P29508 390 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 PRMT2P55345 433 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ZBTB16Q05516 673 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 MPP3Q13368 585 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 DLG2Q15700 870 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 PCSK7Q16549 785 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 FASTKD1Q53R41 847 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 RAP1GAP2Q684P5 730 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 DEFB128Q7Z7B8 93 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ARID3BQ8IVW6 561 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 SPPL2BQ8TCT7 592 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 PABPC5Q96DU9 382 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 TBL1YQ9BQ87 522 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 TTPALQ9BTX7 342 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 FICDQ9BVA6 458 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 TMEM120AQ9BXJ8 343 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ZYG11BQ9C0D3 744 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 CAB39LQ9H9S4 337 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 FBXO6Q9NRD1 293 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 SNX15Q9NRS6 342 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 TXLNGQ9NUQ3 528 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 CLIC5Q9NZA1 410 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 IL37Q9NZH6 218 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 TMEM216Q9P0N5 145 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 EMCNQ9ULC0 261 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 MTO1Q9Y2Z2 717 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 CDY1Q9Y6F8 540 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 J3KR12 359 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 PITPNM1O00562 1244 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 PSMD3O43242 534 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 RTN3O95197 1032 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 VNN2O95498 520 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 GSRP00390 522 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 HAPLN1P10915 354 aaPredicted RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 LIMK2P53671 638 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 MAXP61244 160 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 RPL10AP62906 217 aaKnown RBP7.7□□□□□ -1.18
IFT88-201ENST00000319980 ITKQ08881 620 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ARHGEF6Q15052 776 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 FBXL22Q6P050 247 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ASRGL1Q7L266 308 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 CLNKQ7Z7G1 428 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 NPAS4Q8IUM7 802 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 IGSF8Q969P0 613 aa7.7□□□□□ -1.18
IFT88-201ENST00000319980 ARMC5Q96C12 935 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms