RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NCAM2O15394 837 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 SEC13P55735 322 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 MTM1Q13496 603 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 ERCC6LQ2NKX8 1250 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 ACCSLQ4AC99 568 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 ADIPOR2Q86V24 386 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 ADHFE1Q8IWW8 467 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 OR6K2Q8NGY2 324 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 TM6SF2Q9BZW4 377 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 NT5MQ9NPB1 228 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 UBP1Q9NZI7 540 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 OR51B4Q9Y5P0 310 aa15.71■□□□□ 0.1
PDLIM5-202ENST00000318007 LOC730098B7Z3J9 87 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 SMAD6O43541 496 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 KRT14P02533 472 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 PTPN3P26045 913 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 PTGIRP43119 386 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 WASHC5Q12768 1159 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 XRCC4Q13426 336 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 PUS10Q3MIT2 529 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 MBLAC2Q68D91 279 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 GRAMD4Q6IC98 578 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 PID1Q7Z2X4 250 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 ZNF567Q8N184 647 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 ATP11CQ8NB49 1132 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 TSEN2Q8NCE0 465 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 C2orf49Q9BVC5 232 aaPredicted RBP15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 TNKS2Q9H2K2 1166 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 RBM22Q9NW64 420 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 IGSF9Q9P2J2 1179 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 DMGDHQ9UI17 866 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 CA14Q9ULX7 337 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 BPTFQ12830 3046 aa15.7■□□□□ 0.1
PDLIM5-202ENST00000318007 BCLAF3A2AJT9 711 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 ZBTB24O43167 697 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 KDELR3O43731 214 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 PRAMEF11O60813 436 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 HEXIM1O94992 359 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 GAS8O95995 478 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 HLA-DQB2P05538 268 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 CISD3P0C7P0 127 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 CCNCP24863 283 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 BASP1P80723 227 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 GUCY2DQ02846 1103 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 GPS1Q13098 491 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 TDGQ13569 410 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 PON2Q15165 354 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 KDELC2Q7Z4H8 507 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 AHI1Q8N157 1196 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 CCDC26Q8TAB7 109 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 LMLNQ96KR4 655 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 ACE2Q9BYF1 805 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 MTG2Q9H4K7 406 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 PRDM16Q9HAZ2 1276 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 UBA2Q9UBT2 640 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 PCYOX1Q9UHG3 505 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 SLCO3A1Q9UIG8 710 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 ATG2BQ96BY7 2078 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 HACD1B0YJ81 288 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 SPECC1L-ADORA2AF8WAN1 911 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 MUSKO15146 869 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 MATN3O15232 486 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 PEX11BO96011 259 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 POLR2EP19388 210 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 CTHP32929 405 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 ZNF235Q14590 738 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 LBRQ14739 615 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 ANKRD20A2Q5SQ80 823 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 ANKRD20A1Q5TYW2 823 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 EMC10Q5UCC4 262 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 MARC1Q5VT66 337 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 ANKRD20A3Q5VUR7 823 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 TIGD7Q6NT04 549 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 DRICH1Q6PGQ1 229 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 ARHGEF18Q6ZSZ5 1173 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 DCAF4L2Q8NA75 395 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 GRK7Q8WTQ7 553 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 NSMCE1Q8WV22 266 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 PDFQ9HBH1 243 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 RAD54BQ9Y620 910 aa15.69■□□□□ 0.1
PDLIM5-202ENST00000318007 TMCC1O94876 653 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 KAT7O95251 611 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 CD160O95971 181 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 RPL22P35268 128 aaKnown RBP15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 ACTN2P35609 894 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 ADCY8P40145 1251 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 MMP13P45452 471 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 GALK1P51570 392 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 IL10RBQ08334 325 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 OLIG2Q13516 323 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 P3H1Q32P28 736 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 ATXN7L2Q5T6C5 722 aaPredicted RBP15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 RNF43Q68DV7 783 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 MAATS1Q7Z4T9 603 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 MMGT1Q8N4V1 131 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 CNTD1Q8N815 330 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 TERB1Q8NA31 727 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 UBXN4Q92575 508 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 PNKPQ96T60 521 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 CINPQ9BW66 212 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms