RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 POU4F1Q01851 419 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 AGAP11Q8TF27 550 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TMEM40Q8WWA1 233 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MARK4Q96L34 752 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 DEFB118Q96PH6 123 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TCF7L2Q9NQB0 619 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 RCOR3Q9P2K3 495 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 CASZ1Q86V15 1759 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 DLG5Q8TDM6 1919 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TRPC5OSA6NMA1 111 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CDH13P55290 713 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ABCE1P61221 599 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PURAQ00577 322 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 INCA1Q0VD86 236 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CAPRIN1Q14444 709 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SYTL3Q4VX76 610 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 LRRC8BQ6P9F7 803 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 UBA2Q9UBT2 640 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ARFGEF2Q9Y6D5 1785 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SPATA31D3P0C874 917 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 MLNP12872 115 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 KPNB1Q14974 876 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 FUT11Q495W5 492 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 DPY19L2P1Q6NXN4 242 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SPATA31D4Q6ZUB0 917 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 GLT6D1Q7Z4J2 308 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 BTBD10Q9BSF8 475 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 AURKCQ9UQB9 309 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 E2F6O75461 281 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ESRRBO95718 433 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 EPHA3P29320 983 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CRABP2P29373 138 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 TKTP29401 623 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 VHLP40337 213 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 RGS4P49798 205 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 TAF10Q12962 218 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SEMA5AQ13591 1074 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 BRMS1LQ5PSV4 323 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ANGPTL8Q6UXH0 198 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 TMPRSS6Q8IU80 811 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 QKIQ96PU8 341 aaKnown RBP eCLIP6.28□□□□□ -1.44e-9■■■■■ 31.9
PRKDC-201ENST00000314191 ZCWPW1Q9H0M4 648 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ARL8BQ9NVJ2 186 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 NENFQ9UMX5 172 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 C5orf60A6NFR6 353 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 KRT16P08779 473 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 AIF1P55008 147 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 TEDDM1Q5T9Z0 273 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 MRPL40Q9NQ50 206 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SOX13Q9UN79 622 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ZNF197O14709 1029 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PRPF4O43172 522 aaKnown RBP eCLIP6.28□□□□□ -1.42e-6■■□□□ 14.1
PRKDC-201ENST00000314191 FMO4P31512 558 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SERPINH1P50454 418 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 EPHB3P54753 998 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 DPYSL2Q16555 572 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 RPAINQ86UA6 219 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 C10orf107Q8IVU9 208 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SPPL2BQ8TCT7 592 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CDRT15Q96T59 188 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CYLDQ9NQC7 956 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 C9IYK1 514 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CHRNA4P43681 627 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 GJA9P57773 515 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 BTKQ06187 659 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 KLC1Q07866 573 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 RHBDF2Q6PJF5 856 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 MAMDC4Q6UXC1 1216 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 KYAT3Q6YP21 454 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PQLC3Q8N755 202 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SNX19Q92543 992 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 B3GALT6Q96L58 329 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SMOQ99835 787 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 WDR55Q9H6Y2 383 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SLC17A6Q9P2U8 582 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 BEST1O76090 585 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 BCL2L1Q07817 233 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ZNF252P-AS1Q0IIN9 211 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 NAB1Q13506 487 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 DDX39BQ13838 428 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 KRT33BQ14525 404 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 NCBP2-AS2Q69YL0 99 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 LDB1Q86U70 411 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 FAM124BQ9H5Z6 455 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 THAP1Q9NVV9 213 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 COL16A1Q07092 1604 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 TMEM88BA6NKF7 163 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 KLF1Q13351 362 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PRSS55Q6UWB4 352 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ANKS3Q6ZW76 656 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PCDH20Q8N6Y1 951 aaKnown RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SEC14L1Q92503 715 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PBXIP1Q96AQ6 731 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ADGRE3Q9BY15 652 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CIPCQ9C0C6 399 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 VCX3AQ9NNX9 186 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 MYADML2A6NDP7 307 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms