RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 HEATR9A2RTY3 570 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 ZNF839A8K0R7 811 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 HACD1B0YJ81 288 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 APOA4P06727 396 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 ENTPD1P49961 510 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 NUP107P57740 925 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 GEN1Q17RS7 908 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 MRPL45Q9BRJ2 306 aaKnown RBP11.33□□□□□ -0.6
PTPN7-201ENST00000309017 PNPLA3Q9NST1 481 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 OXSMQ9NWU1 459 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 SH3BP1Q9Y3L3 701 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 COPG1Q9Y678 874 aaKnown RBP11.33□□□□□ -0.6
PTPN7-201ENST00000309017 A0A087WZ62 844 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 DPYSL4O14531 572 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 FOXD2O60548 495 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-201ENST00000309017 TIPRLO75663 272 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 TOMM70O94826 608 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 JUNP05412 331 aaKnown RBP11.33□□□□□ -0.6
PTPN7-201ENST00000309017 ZNF23P17027 643 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 ETFBP38117 255 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 HSDL1Q3SXM5 330 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 AFAP1L2Q8N4X5 818 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 GIPC3Q8TF64 312 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 RNF139Q8WU17 664 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 NDRG1Q92597 394 aaKnown RBP11.33□□□□□ -0.6
PTPN7-201ENST00000309017 LPGAT1Q92604 370 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 SPATA33Q96N06 139 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 FDXACB1Q9BRP7 624 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-201ENST00000309017 MRPL40Q9NQ50 206 aaKnown RBP11.33□□□□□ -0.6
PTPN7-201ENST00000309017 CHRAC1Q9NRG0 131 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 TBC1D23Q9NUY8 699 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-201ENST00000309017 XPR1Q9UBH6 696 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 TNFSF13BQ9Y275 285 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 UBR3Q6ZT12 1888 aa11.33□□□□□ -0.6
PTPN7-201ENST00000309017 BTBD19C9JJ37 291 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 EEF2KO00418 725 aaKnown RBP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 HNRNPLP14866 589 aaKnown RBP eCLIP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 SOX11P35716 441 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 DPP6P42658 865 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 NAA20P61599 178 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 STX5Q13190 355 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 GRM3Q14832 879 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 SOWAHAQ2M3V2 549 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 ANO4Q32M45 955 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 CYGBQ8WWM9 190 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 DRC3Q9H069 523 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 ZBTB26Q9HCK0 441 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 HOXC10Q9NYD6 342 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 VTI1BQ9UEU0 232 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 PRSS51A0A1B0GVH4 220 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 C7orf72A4D263 438 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 SLCO1B7G3V0H7 640 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 PFKMP08237 780 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 HSPA8P11142 646 aaKnown RBP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 RPL10P27635 214 aaKnown RBP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 CDK9P50750 372 aaKnown RBP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 CXCL9Q07325 125 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 IKBKEQ14164 716 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 ZNF460Q14592 562 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 IL31Q6EBC2 164 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 C16orf87Q6PH81 154 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 METTL7BQ6UX53 244 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 TMEM126BQ8IUX1 230 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 ACVR1CQ8NER5 493 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 PLGRKTQ9HBL7 147 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 ANKRD31Q8N7Z5 1873 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 E7ENX8 843 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 BOLA2-SMG1P6H3BVE0 249 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 OAZ1P54368 228 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 CBX3Q13185 183 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 APOFQ13790 326 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 TRIM25Q14258 630 aaKnown RBP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 KIZQ2M2Z5 673 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 SLC41A1Q8IVJ1 513 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 EXOC8Q8IYI6 725 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 DEFB106AQ8N104 65 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 TTC39CQ8N584 583 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 ASB7Q9H672 318 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 CLK4Q9HAZ1 481 aaKnown RBP11.32□□□□□ -0.6
PTPN7-201ENST00000309017 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 CENPFP49454 3210 aa11.32□□□□□ -0.6
PTPN7-201ENST00000309017 TRPC5OSA6NMA1 111 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 GAS2O43903 313 aaKnown RBP11.31□□□□□ -0.6
PTPN7-201ENST00000309017 CABYRO75952 493 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 TFPTP0C1Z6 253 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 HDCP19113 662 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 CCR3P51677 355 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 MAPK10P53779 464 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 FASTKQ14296 549 aaKnown RBP11.31□□□□□ -0.6
PTPN7-201ENST00000309017 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 PSTKQ8IV42 348 aaKnown RBP11.31□□□□□ -0.6
PTPN7-201ENST00000309017 TP53INP2Q8IXH6 220 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 AGBL3Q8NEM8 1001 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms