RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DBX2Q6ZNG2 339 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 OR2T34Q8NGX1 318 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 SNX19Q92543 992 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 C2orf49Q9BVC5 232 aaPredicted RBP20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 ACE2Q9BYF1 805 aaPredicted RBP20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 AIPL1Q9NZN9 384 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 OR12D3Q9UGF7 316 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 NCKAP1Q9Y2A7 1128 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 ARID1BQ8NFD5 2236 aaPredicted RBP20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 LATO43561 262 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 CBFA2T3O75081 653 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 TOP3BO95985 862 aaKnown RBP20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 WNT1P04628 370 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 PRKCIP41743 596 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 AFF3P51826 1226 aaKnown RBP20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 ZNF143P52747 638 aaPredicted RBP20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 TAS2R38P59533 333 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 PPP2CBP62714 309 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 PPP2CAP67775 309 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 DNAAF5Q86Y56 855 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 OR8D1Q8WZ84 308 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 CAMK1GQ96NX5 476 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 OMDQ99983 421 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 SELENOOQ9BVL4 669 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 CBX8Q9HC52 389 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 ARHGAP20Q9P2F6 1191 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 ACTL7AQ9Y615 435 aa20.29■□□□□ 0.84
PDZRN3-202ENST00000308537 SH3BP5O60239 455 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 ZNF883P0CG24 379 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 CCR5P51681 352 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 CLCN6P51797 869 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 KRT83P78385 493 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 GNA12Q03113 381 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 CNTN1Q12860 1018 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 HLA-BQ31612 363 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 ACCSLQ4AC99 568 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 ZNF571Q7Z3V5 609 aaPredicted RBP20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 PYROXD2Q8N2H3 581 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 CHST14Q8NCH0 376 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 PIP4K2CQ8TBX8 421 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 GANCQ8TET4 914 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 SLC6A18Q96N87 628 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 MCEEQ96PE7 176 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 NOL6Q9H6R4 1146 aaKnown RBP20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 GAREM1Q9H706 876 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 TMEM248Q9NWD8 314 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 SNX11Q9Y5W9 270 aa20.28■□□□□ 0.84
PDZRN3-202ENST00000308537 SPAARA0A1B0GVQ0 90 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 A0A1W2PR77 199 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 FAM47DPA6NHR8 397 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 PLRG1O43660 514 aaKnown RBP20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 RTN2O75298 545 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 RHOQP17081 205 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 ACVRL1P37023 503 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 CTSKP43235 329 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 RACK1P63244 317 aaKnown RBP20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 PIP5KL1Q5T9C9 394 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 PLEKHA7Q6IQ23 1121 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 DNAJC24Q6P3W2 148 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 C22orf39Q6P5X5 142 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 LUZP1Q86V48 1076 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 DRC7Q8IY82 874 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 ARFGAP1Q8N6T3 406 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 ATP11CQ8NB49 1132 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 BAHD1Q8TBE0 780 aaPredicted RBP20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 HAUS4Q9H6D7 363 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 SEPT11Q9NVA2 429 aaKnown RBP20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 ANKRD6Q9Y2G4 727 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 WASF2Q9Y6W5 498 aa20.27■□□□□ 0.84
PDZRN3-202ENST00000308537 LRRC72A6NJI9 287 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 DDX3XO00571 662 aaKnown RBP eCLIP20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 SLC7A4O43246 635 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 PLEKP08567 350 aaPredicted RBP20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 SERPINH1P50454 418 aaKnown RBP20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 SFSWAPQ12872 951 aaKnown RBP20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 MAMLD1Q13495 774 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 ARL13BQ3SXY8 428 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 POM121L1PQ3SYA9 428 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 FIGNQ5HY92 759 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 OR14C36Q8NHC7 312 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 ARHGEF2Q92974 986 aaKnown RBP20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 ARRDC3Q96B67 414 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 VCPIP1Q96JH7 1222 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 CNPY3Q9BT09 278 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 TMEM121BQ9BXQ6 578 aaPredicted RBP20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 RETREG1Q9H6L5 497 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 ANGPTL2Q9UKU9 493 aa20.26■□□□□ 0.83
PDZRN3-202ENST00000308537 CXorf51AA0A1B0GTR3 108 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 CBX4O00257 560 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 ATMINO43313 823 aaPredicted RBP20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 CCDC172P0C7W6 258 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 L1CAMP32004 1257 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 CHRNA3P32297 505 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 MAPKAPK2P49137 400 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 ZNF423Q2M1K9 1284 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 HGSNATQ68CP4 663 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 IL27RAQ6UWB1 636 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 DPY19L3Q6ZPD9 716 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 DSG4Q86SJ6 1040 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms