RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 DNAJB7Q7Z6W7 309 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SLC26A11Q86WA9 606 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 LRRC6Q86X45 466 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 OR52K1Q8NGK4 314 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 PSMG2Q969U7 264 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 MRRFQ96E11 262 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 MYEOVQ96EZ4 313 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 HMCESQ96FZ2 354 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 OXNAD1Q96HP4 312 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 RPRD1AQ96P16 312 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 TRIM56Q9BRZ2 755 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 MTIF3Q9H2K0 278 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 PPANQ9NQ55 473 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SMYD2Q9NRG4 433 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SYBUQ9NX95 663 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 UXTQ9UBK9 157 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 AAR2Q9Y312 384 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 INSL6Q9Y581 213 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 IQANK1A0A1B0GTG1 560 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 GOLGA6L7A0A1B0GV03 622 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 A0A1W2PPM1 405 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 FAM47DPA6NHR8 397 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 CXorf49A8MYA2 514 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 F5H5T6 163 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 AP3B1O00203 1094 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 FAM155BO75949 473 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 ANXA9O76027 345 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 STC2O76061 302 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 FAM107AO95990 144 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 HLA-DQB2P05538 268 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 INHBAP08476 426 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SLC6A4P31645 630 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SLC11A2P49281 568 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 YBEYP58557 167 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 CRADDP78560 199 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 TNK2Q07912 1038 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 HNRNPDQ14103 355 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 TAF12Q16514 161 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 PARP15Q460N3 678 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 NAPEPLDQ6IQ20 393 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 ZNF449Q6P9G9 518 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 TRMT10BQ6PF06 316 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 OTOP3Q7RTS5 596 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 TMEM150AQ86TG1 271 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 PPM1NQ8N819 430 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 TTC17Q96AE7 1141 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 ZNF317Q96PQ6 595 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SMC6Q96SB8 1091 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 KLF16Q9BXK1 252 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 NACA2Q9H009 215 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 NKX2-4Q9H2Z4 354 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 KIF9Q9HAQ2 790 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 KCNK9Q9NPC2 374 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SMG5Q9UPR3 1016 aaKnown RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 IKBKGQ9Y6K9 419 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 TYROBPO43914 113 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 USP12O75317 370 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 F11P03951 625 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 CNPP09543 421 aaKnown RBP12.1□□□□□ -0.47
TRIM40-205ENST00000307859 NPY2RP49146 381 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 FOXK2Q01167 660 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 NIPAL4Q0D2K0 466 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 NAB1Q13506 487 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 OLIG2Q13516 323 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 FRG1Q14331 258 aaKnown RBP12.1□□□□□ -0.47
TRIM40-205ENST00000307859 CRYMQ14894 314 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 SPANXN3Q5MJ09 141 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 CASC4Q6P4E1 433 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 MARK2Q7KZI7 788 aaKnown RBP12.1□□□□□ -0.47
TRIM40-205ENST00000307859 LINC00523Q86TU6 105 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 ITIH5Q86UX2 942 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 LGI2Q8N0V4 545 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 TEX26Q8N6G2 289 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 SGSM3Q96HU1 749 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 CCT8L2Q96SF2 557 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 RNF38Q9H0F5 515 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 IL21Q9HBE4 155 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
TRIM40-205ENST00000307859 RBM22Q9NW64 420 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM40-205ENST00000307859 PIH1D1Q9NWS0 290 aaKnown RBP12.1□□□□□ -0.47
TRIM40-205ENST00000307859 BFARQ9NZS9 450 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 ASB3Q9Y575 518 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 ATG2AQ2TAZ0 1938 aa12.1□□□□□ -0.47
TRIM40-205ENST00000307859 C2orf78A6NCI8 922 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 NDUFAB1O14561 156 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 RAMP2O60895 175 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 OLFM2O95897 454 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 KLKB1P03952 638 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 CORO1AP31146 461 aaKnown RBP12.09□□□□□ -0.47
TRIM40-205ENST00000307859 RENBPP51606 427 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 GEMP55040 296 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 IL10RBQ08334 325 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 SERINC3Q13530 473 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 POLD3Q15054 466 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-205ENST00000307859 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
TRIM40-205ENST00000307859 TTC39BQ5VTQ0 682 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms