RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MT-CYBP00156 380 aaPredicted RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 VDRP11473 427 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 SPRP35270 261 aaPredicted RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 RBP5P82980 135 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 KRT72Q14CN4 511 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 PLCL1Q15111 1095 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 LSM12Q3MHD2 195 aaKnown RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 MAP3K21Q5TCX8 1036 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 CLEC6AQ6EIG7 209 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 ARMCX2Q7L311 632 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 LPCAT2Q7L5N7 544 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 TTC30AQ86WT1 665 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 ZNF398Q8TD17 642 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 SIGLEC10Q96LC7 697 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 CSPG4P5Q96PW8 444 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 KCTD15Q96SI1 283 aaPredicted RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 TINF2Q9BSI4 451 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 FTHL17Q9BXU8 183 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 DMAP1Q9NPF5 467 aaPredicted RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 SETD4Q9NVD3 440 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 PIN4Q9Y237 131 aaKnown RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 LAMA3Q16787 3333 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 CASP8AP2Q9UKL3 1982 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 C2CD4BA6NLJ0 364 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 MAN1A2O60476 641 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 ARF4P18085 180 aaPredicted RBP14.83□□□□□ -0.03
PTPN9-201ENST00000306726 MPP1Q00013 466 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 CARTPTQ16568 116 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 IER5Q5VY09 327 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 FSTL4Q6MZW2 842 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 ZNF276Q8N554 614 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 KHSRPQ92945 711 aaKnown RBP eCLIP14.83□□□□□ -0.03
PTPN9-201ENST00000306726 PKP2Q99959 881 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 ZNF518BQ9C0D4 1074 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 XYLT2Q9H1B5 865 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 SFMBT1Q9UHJ3 866 aa14.83□□□□□ -0.03
PTPN9-201ENST00000306726 KPNA7A9QM74 516 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 TRIM13O60858 407 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 PTPN1P18031 435 aaKnown RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 PPP1R2P3Q6NXS1 205 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CPNE9Q8IYJ1 553 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 FBXW8Q8N3Y1 598 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CMASQ8NFW8 434 aaPredicted RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 AFG1LQ8WV93 481 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CERS2Q96G23 380 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CCDC106Q9BWC9 280 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 PAIP1Q9H074 479 aaKnown RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 ARHGEF38Q9NXL2 777 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 BARX2Q9UMQ3 279 aaPredicted RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 SCAMP3O14828 347 aaKnown RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 HMBSP08397 361 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CYP3A5P20815 502 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 ARL2P36404 184 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 ADARP55265 1226 aaKnown RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CAPRIN1Q14444 709 aaKnown RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 IQSEC1Q6DN90 963 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 NT5DC4Q86YG4 428 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 THAP11Q96EK4 314 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 B3GALT6Q96L58 329 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 ZNF512Q96ME7 567 aaPredicted RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CPSF3Q9UKF6 684 aaKnown RBP14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CDYLQ9Y232 598 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CRYL1Q9Y2S2 319 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 PPME1Q9Y570 386 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CDY2AQ9Y6F7 541 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 CDY1Q9Y6F8 540 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 LRRC37A2A6NM11 1700 aa14.83□□□□□ -0.04
PTPN9-201ENST00000306726 MAGEC1O60732 1142 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 SPAG6O75602 509 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 CRTAMO95727 393 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 CTSHP09668 335 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 FGF3P11487 239 aaPredicted RBP14.82□□□□□ -0.04
PTPN9-201ENST00000306726 PCNAP12004 261 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 ARRB2P32121 409 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 GRIA3P42263 894 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 SERPINB9P50453 376 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 SLC18A2Q05940 514 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 MXD4Q14582 209 aaPredicted RBP14.82□□□□□ -0.04
PTPN9-201ENST00000306726 PCLAFQ15004 111 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 ANKRD20A4Q4UJ75 823 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 RNF111Q6ZNA4 994 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 KCNMB4Q86W47 210 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 CHSY1Q86X52 802 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 URGCPQ8TCY9 931 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 MZB1Q8WU39 189 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 FSD1LQ9BXM9 530 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 ACE2Q9BYF1 805 aaPredicted RBP14.82□□□□□ -0.04
PTPN9-201ENST00000306726 ADNPQ9H2P0 1102 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 UTP6Q9NYH9 597 aaKnown RBP14.82□□□□□ -0.04
PTPN9-201ENST00000306726 XPR1Q9UBH6 696 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 MGAMO43451 1857 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 PLXNA1Q9UIW2 1896 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 HMX2A2RU54 273 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 FARP2O94887 1054 aaPredicted RBP14.82□□□□□ -0.04
PTPN9-201ENST00000306726 MS4A2Q01362 244 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 SLC6A3Q01959 620 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 ZBTB49Q6ZSB9 765 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 PABPC5Q96DU9 382 aaKnown RBP14.82□□□□□ -0.04
PTPN9-201ENST00000306726 CNDP1Q96KN2 507 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms