RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 HP1BP3Q5SSJ5 553 aaPredicted RBP17.87■□□□□ 0.45
KRT28-201ENST00000306658 ANKMY2Q8IV38 441 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 CCDC117Q8IWD4 279 aaPredicted RBP17.87■□□□□ 0.45
KRT28-201ENST00000306658 CARNMT1Q8N4J0 409 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 VN1R2Q8NFZ6 395 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 FCRL5Q96RD9 977 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 CCDC77Q9BR77 488 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 HAUS2Q9NVX0 235 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 TTLL3Q9Y4R7 772 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 KDELR3O43731 214 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 AVILO75366 819 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 SUN1O94901 812 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 LUC7L3O95232 432 aaKnown RBP17.87■□□□□ 0.45
KRT28-201ENST00000306658 CYBBP04839 570 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 MYZAPP0CAP1 466 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 TSHRP16473 764 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 CEBPBP17676 345 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 PHBP35232 272 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 OXCT1P55809 520 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 TNK2Q07912 1038 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 ZNF844Q08AG5 666 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 CDH18Q13634 790 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 TMCO4Q5TGY1 634 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 RNF219Q5W0B1 726 aaPredicted RBP17.87■□□□□ 0.45
KRT28-201ENST00000306658 LRRC8BQ6P9F7 803 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 PALM2Q8IXS6 379 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 TEX26Q8N6G2 289 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 ATP11CQ8NB49 1132 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 FBXO36Q8NEA4 188 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 OR7D4Q8NG98 312 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 SPON2Q9BUD6 331 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 MUC3BQ9H195 1237 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 NSUN3Q9H649 340 aaKnown RBP17.87■□□□□ 0.45
KRT28-201ENST00000306658 LRRC4CQ9HCJ2 640 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 ATP13A1Q9HD20 1204 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 TBC1D14Q9P2M4 693 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.87■□□□□ 0.45
KRT28-201ENST00000306658 A0A087WUV0 522 aaPredicted RBP17.86■□□□□ 0.45
KRT28-201ENST00000306658 BANF1O75531 89 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 SHBGP04278 402 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 HLA-DQB2P05538 268 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 TCF3P15923 654 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 MAGEA3P43357 314 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 MMP13P45452 471 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 SLC10A7Q0GE19 358 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 LBRQ14739 615 aaKnown RBP17.86■□□□□ 0.45
KRT28-201ENST00000306658 CXorf57Q6NSI4 855 aaKnown RBP17.86■□□□□ 0.45
KRT28-201ENST00000306658 TMEM184AQ6ZMB5 413 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 ZNF534Q76KX8 674 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 OTOP3Q7RTS5 596 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 ARID3BQ8IVW6 561 aaPredicted RBP17.86■□□□□ 0.45
KRT28-201ENST00000306658 BBS5Q8N3I7 341 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 OR52K2Q8NGK3 314 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 UHMK1Q8TAS1 419 aaKnown RBP17.86■□□□□ 0.45
KRT28-201ENST00000306658 ING5Q8WYH8 240 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 GORASP1Q9BQQ3 440 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 TMEM109Q9BVC6 243 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 ROPN1BQ9BZX4 212 aaPredicted RBP17.86■□□□□ 0.45
KRT28-201ENST00000306658 LRRC40Q9H9A6 602 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 VPS37BQ9H9H4 285 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 ROPN1Q9HAT0 212 aaPredicted RBP17.86■□□□□ 0.45
KRT28-201ENST00000306658 TEX264Q9Y6I9 313 aa17.86■□□□□ 0.45
KRT28-201ENST00000306658 LAMA3Q16787 3333 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 GOLGA8KD6RF30 607 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 AP3B1O00203 1094 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 HOXD9P28356 352 aaPredicted RBP17.85■□□□□ 0.45
KRT28-201ENST00000306658 ELK3P41970 407 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 GEMP55040 296 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 MTM1Q13496 603 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 UBAP2Q5T6F2 1119 aaKnown RBP17.85■□□□□ 0.45
KRT28-201ENST00000306658 KCTD11Q693B1 232 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 NAPEPLDQ6IQ20 393 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 LINC00523Q86TU6 105 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 MFN1Q8IWA4 741 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 KLHDC8BQ8IXV7 354 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 ITFG1Q8TB96 612 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 ZNF419Q96HQ0 510 aaPredicted RBP17.85■□□□□ 0.45
KRT28-201ENST00000306658 ZSWIM3Q96MP5 696 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 MLPHQ9BV36 600 aaPredicted RBP17.85■□□□□ 0.45
KRT28-201ENST00000306658 ACE2Q9BYF1 805 aaPredicted RBP17.85■□□□□ 0.45
KRT28-201ENST00000306658 SLC25A51Q9H1U9 297 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 PDFQ9HBH1 243 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 NT5MQ9NPB1 228 aa17.85■□□□□ 0.45
KRT28-201ENST00000306658 H3BQF6 201 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 SPAG6O75602 509 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 PRAMEF12O95522 483 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 WEE1P30291 646 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 GRIA1P42261 906 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 ITKQ08881 620 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 RFTN1Q14699 578 aaPredicted RBP17.84■□□□□ 0.45
KRT28-201ENST00000306658 STAT4Q14765 748 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 CBX2Q14781 532 aaPredicted RBP17.84■□□□□ 0.45
KRT28-201ENST00000306658 KRT71Q3SY84 523 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 RARS2Q5T160 578 aaKnown RBP17.84■□□□□ 0.45
KRT28-201ENST00000306658 TPGS1Q6ZTW0 290 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 C3orf62Q6ZUJ4 267 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 CELF5Q8N6W0 485 aaKnown RBP17.84■□□□□ 0.45
KRT28-201ENST00000306658 EFHBQ8N7U6 833 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 OTUB2Q96DC9 234 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 KIF9Q9HAQ2 790 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms