RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 MRPL57Q9BQC6 102 aaKnown RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 PTPRHQ9HD43 1115 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 LEF1Q9UJU2 399 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 CSDE1O75534 798 aaKnown RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 DGCR6Q14129 220 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 TYW3Q6IPR3 259 aaKnown RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 SLC44A2Q8IWA5 706 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 EDEM1Q92611 657 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 MTG1Q9BT17 334 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 CLCA2Q9UQC9 943 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 EFCAB10A6NFE3 127 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 SEC24AO95486 1093 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 TAB1Q15750 504 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 INO80DQ53TQ3 878 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 ARMC3Q5W041 872 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 NAT14Q8WUY8 206 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 SNRNP25Q9BV90 132 aaKnown RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 NUAK2Q9H093 628 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 TAF4O00268 1085 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 THP07101 528 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 EPHA3P29320 983 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 JAM2P57087 298 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 EFEMP1Q12805 493 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 PACS1Q6VY07 963 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 TDRPQ86YL5 185 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 IDI2Q9BXS1 227 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 HDHD2Q9H0R4 259 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 SNX15Q9NRS6 342 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 PNPOQ9NVS9 261 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 SCAF8Q9UPN6 1271 aaKnown RBP13.02□□□□□ -0.32
COL3A1-201ENST00000304636 EFR3BQ9Y2G0 817 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 DHRS12A0PJE2 317 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 LTFP02788 710 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 ALOX5P09917 674 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 ABCG1P45844 678 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 KCTD19Q17RG1 926 aaPredicted RBP13.02□□□□□ -0.32
COL3A1-201ENST00000304636 ZACNQ401N2 412 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 ADGRD1Q6QNK2 874 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 FAM183BPQ6ZVS7 135 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 CCDC80Q76M96 950 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 KBTBD2Q8IY47 623 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 SLC2A14Q8TDB8 520 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 CAPSLQ8WWF8 208 aa13.02□□□□□ -0.32
COL3A1-201ENST00000304636 BTN3A1O00481 513 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 PRRG1O14668 218 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 KPNA1P52294 538 aaPredicted RBP13.02□□□□□ -0.33
COL3A1-201ENST00000304636 OAZ1P54368 228 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 TGFB2P61812 414 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 COX10Q12887 443 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 AMIGO2Q86SJ2 522 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 BPIFB6Q8NFQ5 453 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 RNFT2Q96EX2 444 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 PARK7Q99497 189 aaKnown RBP13.02□□□□□ -0.33
COL3A1-201ENST00000304636 WDR18Q9BV38 432 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 SERHL2Q9H4I8 314 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 ALG9Q9H6U8 611 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 REEP1Q9H902 201 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 SERHLQ9NQF3 203 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 C8orf4Q9NR00 106 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 FAM53CQ9NYF3 392 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 PRKAG2Q9UGJ0 569 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 COG5Q9UP83 839 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 VCLP18206 1134 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 NOS2P35228 1153 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 TUBP50607 506 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 CLCN5P51795 746 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 RAB10P61026 200 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 TRIM71Q2Q1W2 868 aaKnown RBP13.02□□□□□ -0.33
COL3A1-201ENST00000304636 STAG3L4Q8TBR4 150 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 UBASH3BQ8TF42 649 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 TPD52L3Q96J77 140 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 H3BNX3 289 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 GPR182O15218 404 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 S100A3P33764 101 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 GPC1P35052 558 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 PTGIRP43119 386 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 GMPSP49915 693 aaPredicted RBP13.02□□□□□ -0.33
COL3A1-201ENST00000304636 LPIN1Q14693 890 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 DGKKQ5KSL6 1271 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 PERM1Q5SV97 790 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 CCDC149Q6ZUS6 474 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.33
COL3A1-201ENST00000304636 FBXO30Q8TB52 745 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 SPRTNQ9H040 489 aaPredicted RBP13.02□□□□□ -0.33
COL3A1-201ENST00000304636 DNAJC28Q9NX36 388 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 SQORQ9Y6N5 450 aa13.02□□□□□ -0.33
COL3A1-201ENST00000304636 TMEM191CA6NGB0 347 aa13.01□□□□□ -0.33
COL3A1-201ENST00000304636 RAMP2O60895 175 aa13.01□□□□□ -0.33
COL3A1-201ENST00000304636 RHOCP08134 193 aa13.01□□□□□ -0.33
COL3A1-201ENST00000304636 GSTM1P09488 218 aa13.01□□□□□ -0.33
COL3A1-201ENST00000304636 CCDC166P0CW27 439 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms