RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 MTBPQ96DY7 904 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 DDX50Q9BQ39 737 aaKnown RBP12.24□□□□□ -0.45
TPM3-202ENST00000302206 NACA2Q9H009 215 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 NDFIP2Q9NV92 336 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 BFARQ9NZS9 450 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 IPO11Q9UI26 975 aaKnown RBP12.24□□□□□ -0.45
TPM3-202ENST00000302206 LZTS1Q9Y250 596 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 TEX28O15482 410 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 RAMP2O60895 175 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 KRT37O76014 449 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 CNTN5O94779 1100 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 FAM107AO95990 144 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 PEX11BO96011 259 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 C1RP00736 705 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 POLBP06746 335 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 HMBSP08397 361 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 GBP2P32456 591 aaPredicted RBP12.23□□□□□ -0.45
TPM3-202ENST00000302206 KCNQ1P51787 676 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 CDH4P55283 916 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 IL10RBQ08334 325 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 MTM1Q13496 603 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 CCDC85BQ15834 202 aaPredicted RBP12.23□□□□□ -0.45
TPM3-202ENST00000302206 ALFQ53S48 1182 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 RABGAP1LQ5R372 815 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 FAM182AQ5T1J6 154 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 CHST9Q7L1S5 443 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 RTL10Q7L3V2 364 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 DNAJB7Q7Z6W7 309 aaPredicted RBP12.23□□□□□ -0.45
TPM3-202ENST00000302206 PRPF39Q86UA1 669 aaKnown RBP12.23□□□□□ -0.45
TPM3-202ENST00000302206 PHOSPHO2Q8TCD6 241 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 DENND1AQ8TEH3 1009 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 NSMCE1Q8WV22 266 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 HMCESQ96FZ2 354 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 CHMP6Q96FZ7 201 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 ZNF599Q96NL3 588 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 RPRD1AQ96P16 312 aaPredicted RBP12.23□□□□□ -0.45
TPM3-202ENST00000302206 CCT8L2Q96SF2 557 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 KLF16Q9BXK1 252 aaPredicted RBP12.23□□□□□ -0.45
TPM3-202ENST00000302206 IL22Q9GZX6 179 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 SLC25A51Q9H1U9 297 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 KCNK9Q9NPC2 374 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 RBM22Q9NW64 420 aaKnown RBP eCLIP12.23□□□□□ -0.45
TPM3-202ENST00000302206 SAMD15Q9P1V8 674 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 STOML2Q9UJZ1 356 aa12.23□□□□□ -0.45
TPM3-202ENST00000302206 NYNRINQ9P2P1 1898 aaKnown RBP12.23□□□□□ -0.45
TPM3-202ENST00000302206 FAM237BA0A1B0GVD1 139 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 ZBBXA8MT70 800 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 GRXCR1A8MXD5 290 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 TYROBPO43914 113 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 KRT38O76015 456 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 STC2O76061 302 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 USP1O94782 785 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 ZWINTO95229 277 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 MT-ND3P03897 115 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 F11P03951 625 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 SNRPAP09012 282 aaKnown RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 CREB1P16220 341 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 PFKLP17858 780 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 IGFBP4P22692 258 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 PBX2P40425 430 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 SESN2P58004 480 aaPredicted RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 SLC18A2Q05940 514 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 NIPAL4Q0D2K0 466 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 CDH17Q12864 832 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 DNAJC3Q13217 504 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 MPP3Q13368 585 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 SERINC3Q13530 473 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 MPP2Q14168 576 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 SPARCL1Q14515 664 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 CRYMQ14894 314 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 POLD3Q15054 466 aaPredicted RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 FAM133BQ5BKY9 247 aaKnown RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 TMEM240Q5SV17 173 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 LILRA6Q6PI73 481 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 CCDC149Q6ZUS6 474 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 TFAP2DQ7Z6R9 452 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 TMEM135Q86UB9 458 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 HERC6Q8IVU3 1022 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 LGI2Q8N0V4 545 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 OR52K1Q8NGK4 314 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 ZNF473Q8WTR7 871 aaKnown RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 PTCD2Q8WV60 388 aaKnown RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 CKAP2Q8WWK9 683 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 HERVK_113Q902F9 699 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 CDKL2Q92772 493 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 OXNAD1Q96HP4 312 aaPredicted RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 ZNF317Q96PQ6 595 aaPredicted RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 RAD9AQ99638 391 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 MAGEH1Q9H213 219 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 PPANQ9NQ55 473 aaKnown RBP12.22□□□□□ -0.45
TPM3-202ENST00000302206 ENTPD7Q9NQZ7 604 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 SYBUQ9NX95 663 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 GGA2Q9UJY4 613 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 IRAK3Q9Y616 596 aa12.22□□□□□ -0.45
TPM3-202ENST00000302206 NUP205Q92621 2012 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 GOLGA6L7A0A1B0GV03 622 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 F5H423 210 aaPredicted RBP12.21□□□□□ -0.45
TPM3-202ENST00000302206 NDUFAB1O14561 156 aa12.21□□□□□ -0.45
TPM3-202ENST00000302206 TM9SF1O15321 606 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms