RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 LINC00523Q86TU6 105 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 TAX1BP1Q86VP1 789 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 LRRC34Q8IZ02 419 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 BANPQ8N9N5 519 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 SGSM3Q96HU1 749 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 UXTQ9UBK9 157 aaPredicted RBP22.7■■□□□ 1.22
SMAD1-201ENST00000302085 ZFP37Q9Y6Q3 630 aaPredicted RBP22.7■■□□□ 1.22
SMAD1-201ENST00000302085 RPS6KL1Q9Y6S9 549 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 TRIM49D1C9J1S8 452 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 CXCL14O95715 111 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 ACVRL1P37023 503 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 GEMP55040 296 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 YBEYP58557 167 aaPredicted RBP22.69■■□□□ 1.22
SMAD1-201ENST00000302085 NIPAL4Q0D2K0 466 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 SLC10A7Q0GE19 358 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 SPANXN3Q5MJ09 141 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 CYP2S1Q96SQ9 504 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 TBL1YQ9BQ87 522 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 SP110Q9HB58 689 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 IL21Q9HBE4 155 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 PRKAG2Q9UGJ0 569 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 SSX2IPQ9Y2D8 614 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 ANAPC1Q9H1A4 1944 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.69■■□□□ 1.22
SMAD1-201ENST00000302085 H3BNC9 293 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 ASMTLO95671 621 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 SNRPAP09012 282 aaKnown RBP22.69■■□□□ 1.22
SMAD1-201ENST00000302085 CA4P22748 312 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 ADRA1AP35348 466 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 CDH17Q12864 832 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 SLC1A5Q15758 541 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 MARC1Q5VT66 337 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 DENND5AQ6IQ26 1287 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 LILRA6Q6PI73 481 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 TMEM135Q86UB9 458 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 TEX26Q8N6G2 289 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 IPMKQ8NFU5 416 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 SLC17A6Q9P2U8 582 aa22.69■■□□□ 1.22
SMAD1-201ENST00000302085 AGO1Q9UL18 857 aaKnown RBP22.69■■□□□ 1.22
SMAD1-201ENST00000302085 MAGEB16A2A368 324 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 HMX2A2RU54 273 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 ATP9BO43861 1147 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 KRT37O76014 449 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 NEBLO76041 1014 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 IRF1P10914 325 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 GBP2P32456 591 aaPredicted RBP22.68■■□□□ 1.22
SMAD1-201ENST00000302085 RPS24P62847 133 aaKnown RBP22.68■■□□□ 1.22
SMAD1-201ENST00000302085 SLC18A2Q05940 514 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 IL10RBQ08334 325 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 MARK2Q7KZI7 788 aaKnown RBP22.68■■□□□ 1.22
SMAD1-201ENST00000302085 CPLX4Q7Z7G2 160 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 ZNF354CQ86Y25 554 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 PABPC5Q96DU9 382 aaKnown RBP22.68■■□□□ 1.22
SMAD1-201ENST00000302085 SLC22A12Q96S37 553 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 FICDQ9BVA6 458 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 SLC25A51Q9H1U9 297 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 NT5MQ9NPB1 228 aa22.68■■□□□ 1.22
SMAD1-201ENST00000302085 AP3B1O00203 1094 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 TNK2Q07912 1038 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 ANKRD20A4Q4UJ75 823 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 LGSNQ5TDP6 509 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 ITIH5Q86UX2 942 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 ALKBH8Q96BT7 664 aaKnown RBP22.67■■□□□ 1.22
SMAD1-201ENST00000302085 ZFRQ96KR1 1074 aaKnown RBP22.67■■□□□ 1.22
SMAD1-201ENST00000302085 PRICKLE1Q96MT3 831 aaPredicted RBP22.67■■□□□ 1.22
SMAD1-201ENST00000302085 PPP1R2P1Q96PQ5 205 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 IL22Q9GZX6 179 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 CHRAC1Q9NRG0 131 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 FAM169AQ9Y6X4 670 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 ZCWPW2A0A1B0GU75 182 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 FAM237BA0A1B0GVD1 139 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 PMPCBO75439 489 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 ERVK-10P10266 1014 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 PYGBP11216 843 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 FOXN2P32314 431 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 MGAT5Q09328 741 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 BMPR2Q13873 1038 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 HERC6Q8IVU3 1022 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 OR52K2Q8NGK3 314 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 ZNF669Q96BR6 464 aaPredicted RBP22.67■■□□□ 1.22
SMAD1-201ENST00000302085 IMP4Q96G21 291 aaKnown RBP22.67■■□□□ 1.22
SMAD1-201ENST00000302085 MRGPRX2Q96LB1 330 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 RETREG1Q9H6L5 497 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 SMPD4Q9NXE4 827 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 IL1RAPL1Q9NZN1 696 aa22.67■■□□□ 1.22
SMAD1-201ENST00000302085 MKI67P46013 3256 aaKnown RBP22.66■■□□□ 1.22
SMAD1-201ENST00000302085 TCP11X1B4DZS4 312 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 PRAMEF11O60813 436 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 USP1O94782 785 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 VIMP08670 466 aaKnown RBP22.66■■□□□ 1.22
SMAD1-201ENST00000302085 MBL2P11226 248 aaPredicted RBP22.66■■□□□ 1.22
SMAD1-201ENST00000302085 SGSHP51688 502 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 CDH4P55283 916 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 IL9RQ01113 521 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 FRG1Q14331 258 aaKnown RBP22.66■■□□□ 1.22
SMAD1-201ENST00000302085 RABGAP1LQ5R372 815 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 ADGRF1Q5T601 910 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 TXNDC8Q6A555 127 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 KDELC1Q6UW63 502 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 TMC7Q7Z402 723 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms