RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 STXBP5Q5T5C0 1151 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 C1orf127Q8N9H9 656 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 PPP1R14BQ96C90 147 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 CSPG4P5Q96PW8 444 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 PDLIM7Q9NR12 457 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 CHST12Q9NRB3 414 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 MORF4L1Q9UBU8 362 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 RBMX2Q9Y388 322 aaKnown RBP11.59□□□□□ -0.55
TRUB1-201ENST00000298746 ADAMTSL1Q8N6G6 1762 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 TMEM114B3SHH9 223 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 H3BNH8 94 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 ZNF195O14628 629 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 UBDO15205 165 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 TIMM44O43615 452 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 JUNP05412 331 aaKnown RBP11.59□□□□□ -0.55
TRUB1-201ENST00000298746 UGT1A6P19224 532 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 UGT1A1P22309 533 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 UGT1A4P22310 534 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 UGT1A3P35503 534 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 UGT1A5P35504 534 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 SLC7A2P52569 658 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 HMGCS2P54868 508 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 SEMA5AQ13591 1074 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 ZNF460Q14592 562 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 PLCL1Q15111 1095 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 CERCAMQ5T4B2 595 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 LIPMQ5VYY2 423 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 RSBN1LQ6PCB5 846 aaPredicted RBP11.59□□□□□ -0.55
TRUB1-201ENST00000298746 USP33Q8TEY7 942 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 BORCS5Q969J3 196 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 VPS50Q96JG6 964 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 RBBP8Q99708 897 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 ADNPQ9H2P0 1102 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 PRDM12Q9H4Q4 367 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 XPR1Q9UBH6 696 aa11.59□□□□□ -0.55
TRUB1-201ENST00000298746 ZBBXA8MT70 800 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 PLOD2O00469 737 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 MPOP05164 745 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 TSPAN8P19075 237 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 EPHX2P34913 555 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 YAP1P46937 504 aaKnown RBP11.58□□□□□ -0.55
TRUB1-201ENST00000298746 CLCN3P51790 818 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 SLC6A3Q01959 620 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 APOFQ13790 326 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 DCAF6Q58WW2 860 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 EGFLAMQ63HQ2 1017 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 TMEM26Q6ZUK4 368 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 CXorf38Q8TB03 319 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 CANT1Q8WVQ1 401 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 MPHOSPH6Q99547 160 aaKnown RBP11.58□□□□□ -0.55
TRUB1-201ENST00000298746 CCDC68Q9H2F9 335 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 TMEM134Q9H6X4 195 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 CPSF3Q9UKF6 684 aaKnown RBP11.58□□□□□ -0.55
TRUB1-201ENST00000298746 TRIM17Q9Y577 477 aa11.58□□□□□ -0.55
TRUB1-201ENST00000298746 TMX2-CTNND1H3BSU7 103 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 HTRA2O43464 458 aaPredicted RBP11.58□□□□□ -0.56
TRUB1-201ENST00000298746 CILPO75339 1184 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 STBD1O95210 358 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 STAG3L1P0CL83 205 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 CDH3P22223 829 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 DPP6P42658 865 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 LIMK2P53671 638 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 SP2Q02086 613 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 DPYSQ14117 519 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 MAPRE2Q15555 327 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 PPP1R26Q5T8A7 1209 aaPredicted RBP11.58□□□□□ -0.56
TRUB1-201ENST00000298746 RYBPQ8N488 228 aaPredicted RBP11.58□□□□□ -0.56
TRUB1-201ENST00000298746 PHF21BQ96EK2 531 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 ABCA3Q99758 1704 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 GPATCH1Q9BRR8 931 aaKnown RBP11.58□□□□□ -0.56
TRUB1-201ENST00000298746 MAP3K20Q9NYL2 800 aaKnown RBP11.58□□□□□ -0.56
TRUB1-201ENST00000298746 CROTQ9UKG9 612 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 TRPC5OSA6NMA1 111 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 C9JVG2 144 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 MFSD11O43934 449 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 RGS20O76081 388 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 ATG7O95352 703 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
TRUB1-201ENST00000298746 MT-ND1P03886 318 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 GNAO1P09471 354 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 PIM1P11309 404 aaPredicted RBP11.58□□□□□ -0.56
TRUB1-201ENST00000298746 NR4A1P22736 598 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 GLDCP23378 1020 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 LRPAP1P30533 357 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 NR2C2P49116 596 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 GNA12Q03113 381 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 SPANXN3Q5MJ09 141 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 PERM1Q5SV97 790 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
TRUB1-201ENST00000298746 XRRA1Q6P2D8 792 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 ILDR2Q71H61 639 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 CLEC4CQ8WTT0 213 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 PLEKHA8Q96JA3 519 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 CCDC138Q96M89 665 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 ZBTB26Q9HCK0 441 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 SPAG4Q9NPE6 437 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 CHRAC1Q9NRG0 131 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 VPS45Q9NRW7 570 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 PKD2L2Q9NZM6 624 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 IGSF9Q9P2J2 1179 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms