RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 C6orf52Q5T4I8 152 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 BNIPLQ7Z465 357 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 KBTBD2Q8IY47 623 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 BSNDQ8WZ55 320 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 NT5MQ9NPB1 228 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 SCHIP1Q9P0W5 487 aaPredicted RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 KIF17Q9P2E2 1029 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 PRRC2BQ5JSZ5 2229 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 GPR25O00155 361 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 UGT1A9O60656 530 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 TRIM16O95361 564 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 MMP8P22894 467 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 EIF2B2P49770 351 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 SGCGQ13326 291 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 GALNTL6Q49A17 601 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 PTPN20Q4JDL3 420 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 KYAT3Q6YP21 454 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 PLD3Q8IV08 490 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 MIER2Q8N344 545 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 ZNF513Q8N8E2 541 aaPredicted RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 MAGEB10Q96LZ2 347 aaPredicted RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 NAT9Q9BTE0 207 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 UGT1A7Q9HAW7 530 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 UGT1A10Q9HAW8 530 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 UGT1A8Q9HAW9 530 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 ASAH2Q9NR71 780 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 UTP6Q9NYH9 597 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 PPM1HQ9ULR3 514 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 AFDNP55196 1824 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 SIGLEC16A6NMB1 481 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 DEAF1O75398 565 aaPredicted RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 PSMB4P28070 264 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 OR1D2P34982 312 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 DDX39BQ13838 428 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 TCEA2Q15560 299 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 C12orf29Q8N999 325 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 NFKBIZQ9BYH8 718 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 PLLPQ9Y342 182 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 C2orf81A6NN90 581 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 MRASO14807 208 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 ANXA9O76027 345 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 LINGO3P0C6S8 592 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 FASTKQ14296 549 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 PHF13Q86YI8 300 aaPredicted RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 MYO1HQ8N1T3 1032 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 ZNF555Q8NEP9 628 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 SLC44A1Q8WWI5 657 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 CAPN10Q9HC96 672 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 HBS1LQ9Y450 684 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 TCRBV7S3A2A0A539 114 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 TREHO43280 583 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 DUSP11O75319 330 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 TMEM63AO94886 807 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 BPGMP07738 259 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 F7P08709 466 aaPredicted RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 USP17L7P0C7H9 530 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 GRIA3P42263 894 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 KCNK10P57789 538 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 ITGADQ13349 1161 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 ZIK1Q3SY52 487 aaPredicted RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 PATL1Q86TB9 770 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 DAW1Q8N136 415 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 SUSD6Q92537 303 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 DGCR14Q96DF8 476 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 SLC4A5Q9BY07 1137 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 DMAC2Q9NW81 257 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 CD274Q9NZQ7 290 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 ATXN10Q9UBB4 475 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 UXTQ9UBK9 157 aaPredicted RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 SMIM31A0A1B0GVY4 71 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 B4GALT5O43286 388 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 ADCY6O43306 1168 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 RHOBTB1O94844 696 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 OCM2P0CE71 109 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 OCMP0CE72 109 aaPredicted RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 ACRP10323 421 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 ATP6V1B2P21281 511 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 CYP1B1Q16678 543 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 CNPY1Q3B7I2 92 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 USP41Q3LFD5 358 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 TRMT10BQ6PF06 316 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 PQLC1Q8N2U9 271 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 BRI3BPQ8WY22 251 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 RNF157Q96PX1 679 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 SNRNP25Q9BV90 132 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 ADAM7Q9H2U9 754 aa13.63□□□□□ -0.23
HPS3-201ENST00000296051 RPL26L1Q9UNX3 145 aaKnown RBP13.63□□□□□ -0.23
HPS3-201ENST00000296051 ERI2A8K979 691 aaKnown RBP13.62□□□□□ -0.23
HPS3-201ENST00000296051 SEPT4O43236 478 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 RAMP2O60895 175 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 LRCH4O75427 683 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 CCDC130P13994 396 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms