RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 HCAR3P49019 387 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 GPR15P49685 360 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 IDH3AP50213 366 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 NAB1Q13506 487 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 NAPEPLDQ6IQ20 393 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 SLC41A1Q8IVJ1 513 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 SCUBE1Q8IWY4 988 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 SPDL1Q96EA4 605 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 SLC39A8Q9C0K1 460 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 IL22Q9GZX6 179 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 CSNK1G1Q9HCP0 422 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 MTSS1O43312 755 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 SIN3BO75182 1162 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 TBX10O75333 385 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 PSMG1O95456 288 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 CHRNGP07510 517 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 LPIN1Q14693 890 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 DDR2Q16832 855 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 HIPK4Q8NE63 616 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 NMUR1Q9HB89 426 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 NMRAL1Q9HBL8 299 aa16.08■□□□□ 0.16
NCKIPSD-201ENST00000294129 TDRD15B5MCY1 1934 aaKnown RBP16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 TTC24A2A3L6 582 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 IRAK2O43187 625 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 DCXO43602 365 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 B4GALT3O60512 393 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 TUBP50607 506 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ARPP19P56211 112 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 YWHAHQ04917 246 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ITKQ08881 620 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 RALGPS1Q5JS13 557 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 C1orf146Q5VVC0 180 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 MFSD14CQ5VZR4 134 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 PM20D1Q6GTS8 502 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ESRP1Q6NXG1 681 aaKnown RBP16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 FAM171BQ6P995 826 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 C14orf80Q86SX3 495 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ULK2Q8IYT8 1036 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 THEM5Q8N1Q8 247 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ARHGAP24Q8N264 748 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ENDOVQ8N8Q3 282 aaKnown RBP16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ZSCAN18Q8TBC5 510 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 KCTD4Q8WVF5 259 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 SGF29Q96ES7 293 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 FSD1LQ9BXM9 530 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 TLK1Q9UKI8 766 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 SORBS2O94875 1100 aaKnown RBP16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 BAG2O95816 211 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 CYBAP13498 195 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ELNP15502 786 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 TUBB3Q13509 450 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 SNX30Q5VWJ9 437 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 CD300LGQ6UXG3 332 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 RIPOR1Q6ZS17 1223 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 ZNF280BQ86YH2 543 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 TTC1Q99614 292 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 RBM22Q9NW64 420 aaKnown RBP eCLIP16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 RRN3Q9NYV6 651 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 SOX13Q9UN79 622 aa16.07■□□□□ 0.16
NCKIPSD-201ENST00000294129 LAMA2P24043 3122 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 ZNF236Q9UL36 1845 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 CIB2O75838 187 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 PDE5AO76074 875 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 GRK2P25098 689 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 CCND3P30281 292 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 MAXP61244 160 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 MGAT3Q09327 533 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 TUSC3Q13454 348 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 PDPK2PQ6A1A2 396 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 ARHGAP12Q8IWW6 846 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 PHTF2Q8N3S3 785 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 TBL1YQ9BQ87 522 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 COG4Q9H9E3 785 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 NMRK1Q9NWW6 199 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 STOML1Q9UBI4 398 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 SOAT2O75908 522 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 MPSTP25325 297 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 CCR1P32246 355 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 GRK4P32298 578 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 NPY2RP49146 381 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 ITGA7Q13683 1181 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 NRG4Q8WWG1 115 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 OMDQ99983 421 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 BATF3Q9NR55 127 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 PACSIN3Q9UKS6 424 aa16.06■□□□□ 0.16
NCKIPSD-201ENST00000294129 ERI2A8K979 691 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 G3V2L1 256 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 HLA-DQB2P05538 268 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 HMBSP08397 361 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 FAM163BP0C2L3 166 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 CNGA3Q16281 694 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 CCDC153Q494R4 210 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 SLC9B1Q4ZJI4 515 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 STXBP5Q5T5C0 1151 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 ZNF280DQ6N043 979 aa16.05■□□□□ 0.16
NCKIPSD-201ENST00000294129 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms