RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 MRPS31Q92665 395 aaKnown RBP16.35■□□□□ 0.21
SSRP1-202ENST00000293880 GORASP1Q9BQQ3 440 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 TLR8Q9NR97 1041 aaKnown RBP16.35■□□□□ 0.21
SSRP1-202ENST00000293880 RRN3Q9NYV6 651 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 MYO3AQ8NEV4 1616 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 PTPRMP28827 1452 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 A8MUI8 341 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 TRDMT1O14717 391 aaKnown RBP16.35■□□□□ 0.21
SSRP1-202ENST00000293880 RNASEH1O60930 286 aaKnown RBP16.35■□□□□ 0.21
SSRP1-202ENST00000293880 JAK1P23458 1154 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 RHAGQ02094 409 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 GIPC3Q8TF64 312 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 DNAJB3Q8WWF6 145 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 EIF2S3P41091 472 aaKnown RBP16.34■□□□□ 0.21
SSRP1-202ENST00000293880 MAD2L1Q13257 205 aaPredicted RBP16.34■□□□□ 0.21
SSRP1-202ENST00000293880 TPGS1Q6ZTW0 290 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 KLQ9UEF7 1012 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 BCLAF3A2AJT9 711 aaKnown RBP16.34■□□□□ 0.21
SSRP1-202ENST00000293880 LIN7AO14910 233 aaPredicted RBP16.34■□□□□ 0.21
SSRP1-202ENST00000293880 PEX11AO75192 247 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ACTRT2Q8TDY3 377 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 BTBD9Q96Q07 612 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 SLC35C2Q9NQQ7 365 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 MAT2BQ9NZL9 334 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ANAPC2Q9UJX6 822 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 SPHKAPQ2M3C7 1700 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 GP5P40197 560 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 EPHB3P54753 998 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 SCRN3Q0VDG4 424 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 DPYSL3Q14195 570 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 MARK2Q7KZI7 788 aaKnown RBP16.34■□□□□ 0.21
SSRP1-202ENST00000293880 OR52K1Q8NGK4 314 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 FAM210AQ96ND0 272 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 C1orf50Q9BV19 199 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ATP13A1Q9HD20 1204 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ETNK2Q9NVF9 386 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 TRPM5Q9NZQ8 1165 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 TCEA3O75764 348 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ELOA2Q8IYF1 753 aaPredicted RBP16.34■□□□□ 0.21
SSRP1-202ENST00000293880 SETD9Q8NE22 299 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ZFP14Q9HCL3 533 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ACP6Q9NPH0 428 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 COQ6Q9Y2Z9 468 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 LACTBL1A8MY62 500 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 EGFRP00533 1210 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 GPSM1Q86YR5 675 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ZNF540Q8NDQ6 660 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 CYP2W1Q8TAV3 490 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 PIGKQ92643 395 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 ZBTB45Q96K62 511 aaPredicted RBP16.34■□□□□ 0.21
SSRP1-202ENST00000293880 REEP1Q9H902 201 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 HMG20AQ9NP66 347 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 CATSPERZQ9NTU4 200 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 MAFFQ9ULX9 164 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 IQGAP3Q86VI3 1631 aa16.34■□□□□ 0.21
SSRP1-202ENST00000293880 LYPLA1O75608 230 aaPredicted RBP16.33■□□□□ 0.21
SSRP1-202ENST00000293880 PDIA6Q15084 440 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 C15orf59Q2T9L4 293 aaPredicted RBP16.33■□□□□ 0.21
SSRP1-202ENST00000293880 GCNT7Q6ZNI0 430 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 FBXO33Q7Z6M2 555 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 KLHL23Q8NBE8 558 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 TMEM159Q96B96 161 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 TKTL2Q9H0I9 626 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 CSF1RP07333 972 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 LINC00032P0C843 101 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 RPL14P50914 215 aaKnown RBP16.33■□□□□ 0.21
SSRP1-202ENST00000293880 GPAT3Q53EU6 434 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 PCDHA3Q9Y5H8 950 aa16.33■□□□□ 0.21
SSRP1-202ENST00000293880 ANPEPP15144 967 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.21e-7■■■□□ 15.2
SSRP1-202ENST00000293880 S100A3P33764 101 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 SLC39A12Q504Y0 691 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF544Q6NX49 715 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 IKBIPQ70UQ0 350 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 SV2AQ7L0J3 742 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 HTRA1Q92743 480 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 CCDC115Q96NT0 180 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 MLPHQ9BV36 600 aaPredicted RBP16.33■□□□□ 0.2
SSRP1-202ENST00000293880 IKZF3Q9UKT9 509 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 HPSEQ9Y251 543 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 PNMA8CA0A1B0GUJ8 204 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 LRATO95237 230 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 LSM8O95777 96 aaKnown RBP16.33■□□□□ 0.2
SSRP1-202ENST00000293880 PRLP01236 227 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 TSPAN14Q8NG11 270 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 MECRQ9BV79 373 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 PDGFDQ9GZP0 370 aaPredicted RBP16.33■□□□□ 0.2
SSRP1-202ENST00000293880 FBXO21O94952 628 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 MSX2P35548 267 aaPredicted RBP16.33■□□□□ 0.2
SSRP1-202ENST00000293880 GALK1P51570 392 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 PLD1Q13393 1074 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 AMIGO2Q86SJ2 522 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 RNF180Q86T96 592 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 DEFB106AQ8N104 65 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 GRIN3AQ8TCU5 1115 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 TMEM169Q96HH4 297 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 TEKT5Q96M29 485 aa16.33■□□□□ 0.2
SSRP1-202ENST00000293880 MCUBQ9NWR8 336 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms