RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HECTD3Q5T447 861 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 CCDC149Q6ZUS6 474 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 FUKQ8N0W3 1084 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 FIG4Q92562 907 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 GLMNQ92990 594 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 GNPTGQ9UJJ9 305 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 TMEM191CA6NGB0 347 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 IRF6O14896 467 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 PSMG1O95456 288 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 MLYCDO95822 493 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 ANXA6P08133 673 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 PABPC1P11940 636 aaKnown RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 DCLRE1AQ6PJP8 1040 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 TRMT11Q7Z4G4 463 aaKnown RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 QRFPRQ96P65 431 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 TMEM237Q96Q45 408 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 SYNDIG1Q9H7V2 258 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 SLC9A3R1O14745 358 aaPredicted RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 PPM1LQ5SGD2 360 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 STRADAQ7RTN6 431 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 SYTL1Q8IYJ3 562 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 PPTC7Q8NI37 304 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 COPS5Q92905 334 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 DUSP16Q9BY84 665 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 PSMD12O00232 456 aaPredicted RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 QSOX1O00391 747 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 INPP4BO15327 924 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 CBX6O95503 412 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 PIK3R1P27986 724 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 TTPAP49638 278 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 DDR2Q16832 855 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 TCHHL1Q5QJ38 904 aaPredicted RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 CRELD2Q6UXH1 353 aaPredicted RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 UNC5AQ6ZN44 842 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 RRAGCQ9HB90 399 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 USE1Q9NZ43 259 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 REXO2Q9Y3B8 237 aaKnown RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 TPRKBQ9Y3C4 175 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 CAMTA1Q9Y6Y1 1673 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 A0A0U1RQJ8 604 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 NFKB1P19838 968 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 S100A3P33764 101 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 FAM187BQ17R55 369 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 ZC3H12AQ5D1E8 599 aaKnown RBP12.96□□□□□ -0.33
PTCD1-201ENST00000292478 ZCCHC23Q6ZST2 131 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 IRF2BP1Q8IU81 584 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 CDK20Q8IZL9 346 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 ATL1Q8WXF7 558 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 PIH1D1Q9NWS0 290 aaKnown RBP12.96□□□□□ -0.33
PTCD1-201ENST00000292478 MYRFQ9Y2G1 1151 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 SMIM35A0A1B0GVV1 85 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 ZBTB22O15209 634 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 CLOCKO15516 846 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 FARP2O94887 1054 aaPredicted RBP12.96□□□□□ -0.33
PTCD1-201ENST00000292478 GABRB2P47870 512 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 GRIK3Q13003 919 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 IKBKEQ14164 716 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 UGCGQ16739 394 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 ZNF544Q6NX49 715 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 PIWIL4Q7Z3Z4 852 aaKnown RBP12.96□□□□□ -0.33
PTCD1-201ENST00000292478 SLC44A2Q8IWA5 706 aaPredicted RBP12.96□□□□□ -0.33
PTCD1-201ENST00000292478 UBE2E3Q969T4 207 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 ACP6Q9NPH0 428 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTCD1-201ENST00000292478 SH3BP4Q9P0V3 963 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.33
PTCD1-201ENST00000292478 PSMD7P51665 324 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 BLVRAP53004 296 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 BEX3Q00994 111 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 SMARCB1Q12824 385 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 CYP2A13Q16696 494 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 ATAD3BQ5T9A4 648 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 GPR142Q7Z601 462 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 LUZP2Q86TE4 346 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 MED8Q96G25 268 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 TMEM39AQ9NV64 488 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 SAE1Q9UBE0 346 aaPredicted RBP12.96□□□□□ -0.34
PTCD1-201ENST00000292478 MEI4A8MW99 385 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 GUCY1B2O75343 617 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 ANXA5P08758 320 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 CSH1P0DML2 217 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 CSH2P0DML3 217 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 ACADMP11310 421 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 DARSP14868 501 aaKnown RBP12.96□□□□□ -0.34
PTCD1-201ENST00000292478 ATN1P54259 1190 aaPredicted RBP12.96□□□□□ -0.34
PTCD1-201ENST00000292478 IL5RAQ01344 420 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 SGCGQ13326 291 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 PLEKHA7Q6IQ23 1121 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 BTN2A2Q8WVV5 523 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 MLPHQ9BV36 600 aaPredicted RBP12.96□□□□□ -0.34
PTCD1-201ENST00000292478 C1QTNF7Q9BXJ2 289 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 NLNQ9BYT8 704 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 SYBUQ9NX95 663 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 ARMCX1Q9P291 453 aa12.96□□□□□ -0.34
PTCD1-201ENST00000292478 RAP2CQ9Y3L5 183 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms