RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 RBM22Q9NW64 420 aaKnown RBP eCLIP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 SLC17A7Q9P2U7 560 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 SLC17A6Q9P2U8 582 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 MAGEB16A2A368 324 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 COCHO43405 550 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 GJB5O95377 273 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 URODP06132 367 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 CORO7P57737 925 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 ANKRD20A4Q4UJ75 823 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 FAM133BQ5BKY9 247 aaKnown RBP10.36□□□□□ -0.75
C9orf43-201ENST00000288462 HECTD3Q5T447 861 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 DENND5AQ6IQ26 1287 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 FAM117BQ6P1L5 589 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 GPR65Q8IYL9 337 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 TEX26Q8N6G2 289 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 PLD4Q96BZ4 506 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 KIFC1Q9BW19 673 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 VPS11Q9H270 941 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 CYP4F11Q9HBI6 524 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 UBP1Q9NZI7 540 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 DENND4CQ5VZ89 1909 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.36□□□□□ -0.75
C9orf43-201ENST00000288462 GOLGA6L7A0A1B0GV03 622 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 F5H5T6 163 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 J3KR12 359 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 COPEO14579 308 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 ACSL4O60488 711 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 RAMP2O60895 175 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 MT-CYBP00156 380 aaPredicted RBP10.36□□□□□ -0.75
C9orf43-201ENST00000288462 SLC6A4P31645 630 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 PPM1AP35813 382 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 RENBPP51606 427 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 YBEYP58557 167 aaPredicted RBP10.36□□□□□ -0.75
C9orf43-201ENST00000288462 IFT88Q13099 833 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 SERINC3Q13530 473 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 ARMC3Q5W041 872 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 KDELC1Q6UW63 502 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 CES3Q6UWW8 571 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 SPATA21Q7Z572 469 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 CIR1Q86X95 450 aaPredicted RBP10.36□□□□□ -0.75
C9orf43-201ENST00000288462 IPMKQ8NFU5 416 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 LRRC8CQ8TDW0 803 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 SPOCK2Q92563 424 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 AZIN2Q96A70 460 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 GRAMD1AQ96CP6 724 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 IMP4Q96G21 291 aaKnown RBP10.36□□□□□ -0.75
C9orf43-201ENST00000288462 SRPK1Q96SB4 655 aaKnown RBP10.36□□□□□ -0.75
C9orf43-201ENST00000288462 CPNE1Q99829 537 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 FICDQ9BVA6 458 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 SLC25A51Q9H1U9 297 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 SP110Q9HB58 689 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 MAFFQ9ULX9 164 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 USP15Q9Y4E8 981 aaPredicted RBP10.36□□□□□ -0.75
C9orf43-201ENST00000288462 PSAT1Q9Y617 370 aa10.36□□□□□ -0.75
C9orf43-201ENST00000288462 ATP9BO43861 1147 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 EDF1O60869 148 aaKnown RBP10.35□□□□□ -0.75
C9orf43-201ENST00000288462 KIAA0754O94854 1291 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ERVK-10P10266 1014 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 GP5P40197 560 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ALDH1A3P47895 512 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 IL10RBQ08334 325 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 MPP3Q13368 585 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 PLD1Q13393 1074 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 VEPH1Q14D04 833 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 MROH9Q5TGP6 573 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 TCEAL8Q8IYN2 117 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 LGI2Q8N0V4 545 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 TMEM199Q8N511 208 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ANKS4BQ8N8V4 417 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ACMSDQ8TDX5 336 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 PTCD2Q8WV60 388 aaKnown RBP10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ISL2Q96A47 359 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 TADA1Q96BN2 335 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 MRGPRX2Q96LB1 330 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 C12orf65Q9H3J6 166 aaKnown RBP10.35□□□□□ -0.75
C9orf43-201ENST00000288462 MRM3Q9HC36 420 aaKnown RBP10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ATP13A1Q9HD20 1204 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ENTPD7Q9NQZ7 604 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ZFATQ9P243 1243 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 PRKAG3Q9UGI9 489 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 STARD13Q9Y3M8 1113 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 ALPK3Q96L96 1907 aa10.35□□□□□ -0.75
C9orf43-201ENST00000288462 LILRB3O75022 631 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 RAG1P15918 1043 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PPP3CCP48454 512 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 SLC11A2P49281 568 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 HARS2P49590 506 aaKnown RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 SLC10A7Q0GE19 358 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 POLD3Q15054 466 aaPredicted RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 SEPT7Q16181 437 aaKnown RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 RANBP10Q6VN20 620 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 CDHR3Q6ZTQ4 885 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 NECAB2Q7Z6G3 386 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 ZNF75CPQ92670 426 aaPredicted RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PSMG2Q969U7 264 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 MFSD3Q96ES6 412 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PRICKLE1Q96MT3 831 aaPredicted RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 FAM111AQ96PZ2 611 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 MCMBPQ9BTE3 642 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms