RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 ADH1BP00325 375 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 TMEM253P0C7T8 217 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 C7P10643 843 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 ARF5P84085 180 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 SLC20A2Q08357 652 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 SMTNL2Q2TAL5 461 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 C22orf39Q6P5X5 142 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 SYT12Q8IV01 421 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 SLC41A1Q8IVJ1 513 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 RGL4Q8IZJ4 473 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 HSPH1Q92598 858 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 BTBD1Q9H0C5 482 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 FBXL12Q9NXK8 326 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 UVRAGQ9P2Y5 699 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 EP300Q09472 2414 aaPredicted RBP25.69■■□□□ 1.7
PDF-201ENST00000288022 SDK1Q7Z5N4 2213 aa25.69■■□□□ 1.7
PDF-201ENST00000288022 A0A1W2PP55 124 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 WASH4PA8MWX3 477 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 FOXD2O60548 495 aaPredicted RBP25.68■■□□□ 1.7
PDF-201ENST00000288022 RNASEH2AO75792 299 aaKnown RBP25.68■■□□□ 1.7
PDF-201ENST00000288022 TCF4P15884 667 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 GOT1P17174 413 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 IL1R2P27930 398 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 ACSL1P33121 698 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 DPP6P42658 865 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 RECQLP46063 649 aaPredicted RBP25.68■■□□□ 1.7
PDF-201ENST00000288022 SERPINH1P50454 418 aaKnown RBP25.68■■□□□ 1.7
PDF-201ENST00000288022 AASDHQ4L235 1098 aaPredicted RBP25.68■■□□□ 1.7
PDF-201ENST00000288022 KCNT1Q5JUK3 1230 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 SYCP2LQ5T4T6 812 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 RFX8Q6ZV50 586 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 USP30Q70CQ3 517 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 ZNF419Q96HQ0 510 aaPredicted RBP25.68■■□□□ 1.7
PDF-201ENST00000288022 TNKS2Q9H2K2 1166 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 DONSONQ9NYP3 566 aa25.68■■□□□ 1.7
PDF-201ENST00000288022 TNRC6BQ9UPQ9 1833 aaKnown RBP25.67■■□□□ 1.7
PDF-201ENST00000288022 C5AR1P21730 350 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 GEMIN4P57678 1058 aaKnown RBP25.67■■□□□ 1.7
PDF-201ENST00000288022 YBEYP58557 167 aaPredicted RBP25.67■■□□□ 1.7
PDF-201ENST00000288022 BOLA3Q53S33 107 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 TCEAL6Q6IPX3 200 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 LEKR1Q6ZMV7 388 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 CADM4Q8NFZ8 388 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 NUP205Q92621 2012 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 TCEAL3Q969E4 200 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 NOL6Q9H6R4 1146 aaKnown RBP25.67■■□□□ 1.7
PDF-201ENST00000288022 TMEM74BQ9NUR3 256 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 ACTL7AQ9Y615 435 aa25.67■■□□□ 1.7
PDF-201ENST00000288022 PTPRZ1P23471 2315 aaPredicted RBP25.66■■□□□ 1.7
PDF-201ENST00000288022 RASA4BC9J798 803 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 C1QTNF3-AMACRE9PGA6 284 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 MCF2LO15068 1137 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 ALOX15BO15296 676 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 RASA4O43374 803 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 SEMA4FO95754 770 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 DNA2P51530 1060 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 ZNF135P52742 658 aaPredicted RBP25.66■■□□□ 1.7
PDF-201ENST00000288022 WDR45BQ5MNZ6 344 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 FAM46CQ5VWP2 391 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 UMODL1-AS1Q8N2C9 162 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 HDDC3Q8N4P3 179 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 HMCESQ96FZ2 354 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 CEP44Q9C0F1 390 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 SGK2Q9HBY8 427 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.66■■□□□ 1.7
PDF-201ENST00000288022 SERGEFQ9UGK8 458 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 PILRBQ9UKJ0 227 aa25.66■■□□□ 1.7
PDF-201ENST00000288022 FCF1Q9Y324 198 aaKnown RBP25.66■■□□□ 1.7
PDF-201ENST00000288022 TMEM110-MUSTN1A8MSY1 372 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 PRR5-ARHGAP8B1AHC4 643 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 PATE3B3GLJ2 98 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 H3BRJ5 948 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 KHNYNO15037 678 aaKnown RBP25.65■■□□□ 1.7
PDF-201ENST00000288022 BUB1O43683 1085 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 KDELR3O43731 214 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 RARAP10276 462 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 ARL4AP40617 200 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 ARHGAP8P85298 464 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 HADHQ16836 314 aaKnown RBP25.65■■□□□ 1.7
PDF-201ENST00000288022 POM121L1PQ3SYA9 428 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 PARP15Q460N3 678 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 DCAF12L1Q5VU92 463 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 AADATQ8N5Z0 425 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 OR2A12Q8NGT7 310 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 PIP4K2CQ8TBX8 421 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 SNX19Q92543 992 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 NEUROG2Q9H2A3 272 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 C6orf106Q9H6K1 298 aaPredicted RBP25.65■■□□□ 1.7
PDF-201ENST00000288022 OSGEPQ9NPF4 335 aa25.65■■□□□ 1.7
PDF-201ENST00000288022 CWC15Q9P013 229 aaKnown RBP25.65■■□□□ 1.7
PDF-201ENST00000288022 GVINP1Q7Z2Y8 2422 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.64■■□□□ 1.7
PDF-201ENST00000288022 FAM47DPA6NHR8 397 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 PROSCO94903 275 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 CFIP05156 583 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 ERCC2P18074 760 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 MAOBP27338 520 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 CHRNA3P32297 505 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 GJC1P36383 396 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 SLC25A11Q02978 314 aaKnown RBP25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms