RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 C3orf70A6NLC5 250 aaPredicted RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 RPP40O75818 363 aaKnown RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 C7P10643 843 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 CNR2P34972 360 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 P2RY2P41231 377 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 SERPINH1P50454 418 aaKnown RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 PAPOLAP51003 745 aaKnown RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 RPS14P62263 151 aaKnown RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 SLC20A2Q08357 652 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 PDK2Q15119 407 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 C11orf63Q6NUN7 778 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 RHOT1Q8IXI2 618 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 SIPA1Q96FS4 1042 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 RSPH9Q9H1X1 276 aaPredicted RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 DONSONQ9NYP3 566 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 FCF1Q9Y324 198 aaKnown RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 PROB1E7EW31 1015 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 J3KR12 359 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 ZBTB24O43167 697 aaPredicted RBP20.28■□□□□ 0.84
TIMP4-201ENST00000287814 BCKDHBP21953 392 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 NAP1L1P55209 391 aaKnown RBP20.28■□□□□ 0.84
TIMP4-201ENST00000287814 KIF5AQ12840 1032 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 GSE1Q14687 1217 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 USP39Q53GS9 565 aaKnown RBP20.28■□□□□ 0.84
TIMP4-201ENST00000287814 ANKRD20A8PQ5CZ79 823 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 ZFYVE27Q5T4F4 411 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 ARHGAP36Q6ZRI8 547 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 DAAM2Q86T65 1068 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 ZNF354CQ86Y25 554 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 SUMF1Q8NBK3 374 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 PRCCQ92733 491 aaPredicted RBP20.28■□□□□ 0.84
TIMP4-201ENST00000287814 FAF2Q96CS3 445 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 ZNF670Q9BS34 389 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 EPC1Q9H2F5 836 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 TNKS2Q9H2K2 1166 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 MBD1Q9UIS9 605 aaPredicted RBP20.28■□□□□ 0.84
TIMP4-201ENST00000287814 HPCAL4Q9UM19 191 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 NUP205Q92621 2012 aa20.28■□□□□ 0.84
TIMP4-201ENST00000287814 MACROD2A1Z1Q3 448 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 LRRD1A4D1F6 860 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 BNIP3LO60238 219 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 MARCKSL1P49006 195 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 CLCN6P51797 869 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 LPAL2Q16609 132 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 C22orf39Q6P5X5 142 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 TMCO3Q6UWJ1 677 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 PQLC3Q8N755 202 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 LRRC57Q8N9N7 239 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 OR2A12Q8NGT7 310 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 ITM2CQ9NQX7 267 aa20.27■□□□□ 0.84
TIMP4-201ENST00000287814 GRID2IPA4D2P6 1211 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 DFFAO00273 331 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 SIM2Q14190 667 aaPredicted RBP20.26■□□□□ 0.83
TIMP4-201ENST00000287814 METTL3Q86U44 580 aaKnown RBP20.26■□□□□ 0.83
TIMP4-201ENST00000287814 KBTBD6Q86V97 674 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 MMAAQ8IVH4 418 aaKnown RBP20.26■□□□□ 0.83
TIMP4-201ENST00000287814 MAP7D3Q8IWC1 876 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 LZTR1Q8N653 840 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 KRT35Q92764 455 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 RNF25Q96BH1 459 aaPredicted RBP20.26■□□□□ 0.83
TIMP4-201ENST00000287814 FBRSQ9HAH7 460 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 PDFQ9HBH1 243 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 USP36Q9P275 1121 aaKnown RBP20.26■□□□□ 0.83
TIMP4-201ENST00000287814 CYP8B1Q9UNU6 501 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 GPR179Q6PRD1 2367 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 IGHV1OR15-9A0A0B4J2B8 117 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 CXorf51AA0A1B0GTR3 108 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 RNF103O00237 685 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 KRT1P04264 644 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 TPMTP51580 245 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 METAP1P53582 386 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 ELAVL3Q14576 367 aaKnown RBP20.26■□□□□ 0.83
TIMP4-201ENST00000287814 NCBP2-AS2Q69YL0 99 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 PRR23BQ6ZRT6 265 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 CHST14Q8NCH0 376 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 PDLIM2Q96JY6 352 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 RNF157Q96PX1 679 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 SARDHQ9UL12 918 aa20.26■□□□□ 0.83
TIMP4-201ENST00000287814 ARHGAP42A6NI28 874 aa20.25■□□□□ 0.83
TIMP4-201ENST00000287814 MCF2LO15068 1137 aa20.25■□□□□ 0.83
TIMP4-201ENST00000287814 PRAMEF11O60813 436 aa20.25■□□□□ 0.83
TIMP4-201ENST00000287814 ZNF776Q68DI1 518 aaPredicted RBP20.25■□□□□ 0.83
TIMP4-201ENST00000287814 CEP68Q76N32 757 aa20.25■□□□□ 0.83
TIMP4-201ENST00000287814 KIAA1524Q8TCG1 905 aa20.25■□□□□ 0.83
TIMP4-201ENST00000287814 CALR3Q96L12 384 aaKnown RBP20.25■□□□□ 0.83
TIMP4-201ENST00000287814 CEP44Q9C0F1 390 aa20.25■□□□□ 0.83
TIMP4-201ENST00000287814 DUSP15Q9H1R2 295 aaPredicted RBP20.25■□□□□ 0.83
TIMP4-201ENST00000287814 FRYLO94915 3013 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 ZSCAN5CA6NGD5 496 aaPredicted RBP20.24■□□□□ 0.83
TIMP4-201ENST00000287814 PSTPIP1O43586 416 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 MFSD11O43934 449 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 ZNF217O75362 1048 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 TMCC1O94876 653 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 CTSLP07711 333 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 PAFAH1B3Q15102 231 aaKnown RBP20.24■□□□□ 0.83
TIMP4-201ENST00000287814 CYTH1Q15438 398 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 CST6Q15828 149 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 PLK5Q496M5 336 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 MFSD7Q6UXD7 560 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 DPY19L3Q6ZPD9 716 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms