RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ANXA5P08758 320 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 GIMD1P0DJR0 217 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CEBPGP53567 150 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ILDR2Q71H61 639 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 METTL6Q8TCB7 284 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 STK32AQ8WU08 396 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 FATE1Q969F0 183 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 PLEKHG4BQ96PX9 1271 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF607Q96SK3 696 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CGRRF1Q99675 332 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 MTMR12Q9C0I1 747 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 AASDHPPTQ9NRN7 309 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CCR1P32246 355 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ARL3P36405 182 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 C4orf46Q504U0 113 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 COLGALT2Q8IYK4 626 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 FNDC11Q9BVV2 318 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CIPCQ9C0C6 399 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 POMKQ9H5K3 350 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CATSPERZQ9NTU4 200 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CIDEBQ9UHD4 219 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 FOXN1O15353 648 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 SERPINB7O75635 380 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 H2AFXP16104 143 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 RAP1GAPP47736 663 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 RPL14P50914 215 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 FMR1Q06787 632 aaKnown RBP eCLIP8.84□□□□□ -0.991e-6■■□□□ 13.4
NIPBL-201ENST00000282516 ZNF557Q8N988 423 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ACSF2Q96CM8 615 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 PDLIM2Q96JY6 352 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 EHD1Q9H4M9 534 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 DMGDHQ9UI17 866 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 TRHDEQ9UKU6 1024 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CDC42BPAQ5VT25 1732 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF432O94892 652 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 S100A2P29034 98 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 SYNE4Q8N205 404 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 POC5Q8NA72 575 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ACOT12Q8WYK0 555 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 PHF21BQ96EK2 531 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 SLC4A9Q96Q91 983 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 MED28Q9H204 178 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ARL15Q9NXU5 204 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 GMIPQ9P107 970 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 PRDX5P30044 214 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 NOL9Q5SY16 702 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 HYIQ5T013 277 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 PCDHGB3Q9Y5G1 929 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 WDR27A2RRH5 827 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 BTN3A1O00481 513 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 MNDAP41218 407 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 OLR1P78380 273 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 C1QBPQ07021 282 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 TAF5Q15542 800 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 AMHR2Q16671 573 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 HECTD3Q5T447 861 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 PTAR1Q7Z6K3 402 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 GJD3Q8N144 294 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CAVIN3Q969G5 261 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 THAP2Q9H0W7 228 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 EURLQ9NYK6 297 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ARHGEF33A8MVX0 844 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 RAMP2O60895 175 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ACO1P21399 889 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 POLD2P49005 469 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 EPC2Q52LR7 807 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ERICH5Q6P6B1 374 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 SMIM5Q71RC9 77 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 SYTL5Q8TDW5 730 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ATG4AQ8WYN0 398 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 TDRD1Q9BXT4 1180 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CRISPLD1Q9H336 500 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 PNPLA8Q9NP80 782 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 NARFQ9UHQ1 456 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ZMYM5Q9UJ78 669 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 MINPP1Q9UNW1 487 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 LOC110117498-PIK3R3F6TDL0 507 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 UBA1P22314 1058 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ARHGAP36Q6ZRI8 547 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 OR5T3Q8NGG3 340 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CKAP2Q8WWK9 683 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 R3HDM2Q9Y2K5 976 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 OVOS2A0A0G2JMS6 1433 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 OVOS2A0A0J9YW53 1432 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 OVOS2Q6IE36 1432 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ZBTB14O43829 449 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 PLIN3O60664 434 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 RSL1D1O76021 490 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 DHFRP00374 187 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 JCHAINP01591 159 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CCNYL3P0C7X3 344 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 STXBP1P61764 594 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 SCRN3Q0VDG4 424 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 MARC1Q5VT66 337 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 TCEAL6Q6IPX3 200 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 NET1Q7Z628 596 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 PIK3R3Q92569 461 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 ZC3H10Q96K80 434 aaKnown RBP8.84□□□□□ -0.99
NIPBL-201ENST00000282516 CYP3A43Q9HB55 503 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms