RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TBL1YQ9BQ87 522 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 SAR1AQ9NR31 198 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 KCNK4Q9NYG8 393 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CHKBQ9Y259 395 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 MAGEB16A2A368 324 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CXorf49A8MYA2 514 aaPredicted RBP14.57□□□□□ -0.08
TMEM47-201ENST00000275954 EDN1P05305 212 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 C2P06681 752 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 PYGLP06737 847 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CSH1P0DML2 217 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CSH2P0DML3 217 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 MYL4P12829 197 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 AKT1P31749 480 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 BNIP1Q12981 228 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 LGI2Q8N0V4 545 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CARNMT1Q8N4J0 409 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 SNX27Q96L92 541 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CDRT15Q96T59 188 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 ING2Q9H160 280 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 LGALS13Q9UHV8 139 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CYTH4Q9UIA0 394 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 PLLPQ9Y342 182 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 GLP2RO95838 553 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 MT-CYBP00156 380 aaPredicted RBP14.57□□□□□ -0.08
TMEM47-201ENST00000275954 DLG2Q15700 870 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 TRIM60Q495X7 471 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 GALNTL6Q49A17 601 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 C17orf99Q6UX52 265 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 NAT8LQ8N9F0 302 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 TEKT4Q8WW24 435 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 EMID1Q96A84 441 aaPredicted RBP14.57□□□□□ -0.08
TMEM47-201ENST00000275954 PEBP4Q96S96 227 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 ACE2Q9BYF1 805 aaPredicted RBP14.57□□□□□ -0.08
TMEM47-201ENST00000275954 IL22Q9GZX6 179 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 WDR55Q9H6Y2 383 aaPredicted RBP14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CNGB3Q9NQW8 809 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 VPS28Q9UK41 221 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 CDH9Q9ULB4 789 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 NAV1Q8NEY1 1877 aa14.57□□□□□ -0.08
TMEM47-201ENST00000275954 SOAT2O75908 522 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 LRIG2O94898 1065 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 SERPINF2P08697 491 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 GPX6P59796 221 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 SLC25A11Q02978 314 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 AP1ARQ63HQ0 302 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 DRICH1Q6PGQ1 229 aaPredicted RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 IYDQ6PHW0 289 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 BNC2Q6ZN30 1099 aaPredicted RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 FAM13CQ8NE31 585 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 LPCAT1Q8NF37 534 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 ZSCAN18Q8TBC5 510 aaPredicted RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 SERPINB11Q96P15 392 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 OLA1Q9NTK5 396 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 ZNF358Q9NW07 568 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 RRN3Q9NYV6 651 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 RNF112Q9ULX5 631 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 MFHAS1Q9Y4C4 1052 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 NCOR1O75376 2440 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 MEIS3P2A8K0S8 358 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 F8W8V4 182 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 PRPF4O43172 522 aaKnown RBP eCLIP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 ZNF189O75820 626 aaPredicted RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 CNMDO75829 334 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 HNRNPLP14866 589 aaKnown RBP eCLIP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 OXCT1P55809 520 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 ABCE1P61221 599 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 POU4F1Q01851 419 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 SCARA3Q6AZY7 606 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 C15orf39Q6ZRI6 1047 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 C16orf59Q7L2K0 433 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 ZNF567Q8N184 647 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 PCDH20Q8N6Y1 951 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 PCYOX1LQ8NBM8 494 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 ZMAT2Q96NC0 199 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 RGS18Q9NS28 235 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 MOSPD1Q9UJG1 213 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 USP54Q70EL1 1684 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 TOP3BO95985 862 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 HFE2Q6ZVN8 426 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 SLCO2A1Q92959 643 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 CNBD2Q96M20 576 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 SUFUQ9UMX1 484 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 SNX13Q9Y5W8 968 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 TRPC5OSA6NMA1 111 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 TLL1O43897 1013 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 LGR5O75473 907 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 RHOCP08134 193 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 MBL2P11226 248 aaPredicted RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 IL10P22301 178 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 PTDSS1P48651 473 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 PTK2BQ14289 1009 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 TRMT5Q32P41 509 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 CYP2R1Q6VVX0 501 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 SCAMP5Q8TAC9 235 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 INPP5DQ92835 1189 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 CCDC90BQ9GZT6 254 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 ABCC13Q9NSE7 274 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 TRMT6Q9UJA5 497 aaKnown RBP14.56□□□□□ -0.08
TMEM47-201ENST00000275954 DTNAQ9Y4J8 743 aa14.56□□□□□ -0.08
TMEM47-201ENST00000275954 NR5A2O00482 541 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms