RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 AP4S1Q9Y587 144 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 USP3Q9Y6I4 520 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 H6PDO95479 791 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 ETFBP38117 255 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 GRM3Q14832 879 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 FAM160B1Q5W0V3 765 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 TMEM151AQ8N4L1 468 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
SSC4D-201ENST00000275560 FNDC8Q8TC99 324 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 MIPOL1Q8TD10 442 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 SLCO4A1Q96BD0 722 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 RRN3Q9NYV6 651 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 SFMBT1Q9UHJ3 866 aa18.98■□□□□ 0.63
SSC4D-201ENST00000275560 ZCWPW2A0A1B0GU75 182 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 C9IYK1 514 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 IL18RAPO95256 599 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 GNAO1P09471 354 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 CCDC130P13994 396 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 ICAM3P32942 547 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 SULT2A1Q06520 285 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 NSUN2Q08J23 767 aaKnown RBP eCLIP18.97■□□□□ 0.63
SSC4D-201ENST00000275560 IFRD2Q12894 506 aaPredicted RBP18.97■□□□□ 0.63
SSC4D-201ENST00000275560 GLRA4Q5JXX5 417 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 ERI1Q8IV48 349 aaKnown RBP18.97■□□□□ 0.63
SSC4D-201ENST00000275560 SLC35F5Q8WV83 523 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 DRC3Q9H069 523 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 CYP3A43Q9HB55 503 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 CDK9P50750 372 aaKnown RBP18.97■□□□□ 0.63
SSC4D-201ENST00000275560 PSMD7P51665 324 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 INCA1Q0VD86 236 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 DGKDQ16760 1214 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 EFCAB12Q6NXP0 572 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 SEPT1Q8WYJ6 367 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 VPS39Q96JC1 886 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 SLC39A3Q9BRY0 314 aa18.97■□□□□ 0.63
SSC4D-201ENST00000275560 ZFXP17010 805 aaPredicted RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 PTPRAP18433 802 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 FUT4P22083 530 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 HSPA13P48723 471 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 PSME3P61289 254 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 CXCL9Q07325 125 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 PDAP1Q13442 181 aaKnown RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 TMEM132DQ14C87 1099 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 PKDCCQ504Y2 493 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 SPANXN3Q5MJ09 141 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 HMBOX1Q6NT76 420 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 TMEM110Q86TL2 294 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 CARM1Q86X55 608 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 CLVS1Q8IUQ0 354 aaPredicted RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 FAM47BQ8NA70 645 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 ZNF280CQ8ND82 737 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 VPS28Q9UK41 221 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 VANGL2Q9ULK5 521 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 PCDHGA7Q9Y5G6 932 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 PHIPQ8WWQ0 1821 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 H3BNH8 94 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 TIPRLO75663 272 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 MT-CO1P00395 513 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 ARL4AP40617 200 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 ALDH3B2P48448 385 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 CREB5Q02930 508 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 MPP3Q13368 585 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 LIPMQ5VYY2 423 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 ELMSAN1Q6PJG2 1045 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 TMEM126BQ8IUX1 230 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 HERC6Q8IVU3 1022 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 IRGQQ8WZA9 623 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 LPGAT1Q92604 370 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 ZNF597Q96LX8 424 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 RANBP9Q96S59 729 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 DPP3Q9NY33 737 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 KLHL8Q9P2G9 620 aaPredicted RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 CDC14AQ9UNH5 594 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 RUVBL2Q9Y230 463 aaKnown RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 NUP205Q92621 2012 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 SEC24DO94855 1032 aaPredicted RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 HNRNPLP14866 589 aaKnown RBP eCLIP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 CPSF7Q8N684 471 aaKnown RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 DLG3Q92796 817 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 PPWD1Q96BP3 646 aaKnown RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 RMND5BQ96G75 393 aaPredicted RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 ZBED3Q96IU2 234 aaPredicted RBP18.96■□□□□ 0.63
SSC4D-201ENST00000275560 HAUS8Q9BT25 410 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 C2orf40Q9H1Z8 148 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 THEGQ9P2T0 379 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 MYRFQ9Y2G1 1151 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 TLL2Q9Y6L7 1015 aa18.96■□□□□ 0.63
SSC4D-201ENST00000275560 PRORSD1PA6NEY8 169 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 NEMP2A6NFY4 417 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 TRIM38O00635 465 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 CAPNS1P04632 268 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 UGT1A6P19224 532 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 VARSP26640 1264 aaKnown RBP18.95■□□□□ 0.62
SSC4D-201ENST00000275560 CCR3P51677 355 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 NAB1Q13506 487 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 ANKRD23Q86SG2 305 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 KCNMB4Q86W47 210 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 FIBCD1Q8N539 461 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 HMGCLL1Q8TB92 370 aa18.95■□□□□ 0.62
SSC4D-201ENST00000275560 SREK1Q8WXA9 508 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms