RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 NT5DC4Q86YG4 428 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 SELENOMQ8WWX9 145 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 SPATA13Q96N96 652 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 MRPL9Q9BYD2 267 aaKnown RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP53-201ENST00000274030 DPP7Q9UHL4 492 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 RPL14P50914 215 aaKnown RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 SLC25A3Q00325 362 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 INAQ16352 499 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 TRIM71Q2Q1W2 868 aaKnown RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 ZCCHC8Q6NZY4 707 aaKnown RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 OSCP1Q8WVF1 389 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 SUSD6Q92537 303 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 EMID1Q96A84 441 aaPredicted RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 DNAJC19Q96DA6 116 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 CLIP3Q96DZ5 547 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 RMND5BQ96G75 393 aaPredicted RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 PRDM12Q9H4Q4 367 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 IL1RAPL1Q9NZN1 696 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 ANKRD6Q9Y2G4 727 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 PCDHGC5Q9Y5F6 944 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 NT5C1B-RDH14C9J2C7 533 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 RGS14O43566 566 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 HDCP19113 662 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 IRF8Q02556 426 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 ACAP1Q15027 740 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 CLVS1Q8IUQ0 354 aaPredicted RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 TMEM132CQ8N3T6 1108 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 C19orf18Q8NEA5 215 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 CORO1BQ9BR76 489 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 ZFP14Q9HCL3 533 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 XYLBO75191 536 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 EIF2S1P05198 315 aaKnown RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 ENO2P09104 434 aaPredicted RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 CYP2A6P11509 494 aaPredicted RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 PABPC1P11940 636 aaKnown RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 CHKAP35790 457 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 TALDO1P37837 337 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 DGCR6Q14129 220 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 ADRM1Q16186 407 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 LRRC74BQ6ZQY2 392 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 LRRC55Q6ZSA7 311 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 CYP4Z2PQ8N1L4 340 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 TMEM86AQ8N2M4 240 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 PTGR2Q8N8N7 351 aaPredicted RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 BHLHE22Q8NFJ8 381 aaPredicted RBP11.62□□□□□ -0.55
USP53-201ENST00000274030 USP7Q93009 1102 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 TMEM134Q9H6X4 195 aa11.62□□□□□ -0.55
USP53-201ENST00000274030 LIASO43766 372 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 KLRC4O43908 158 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 AVILO75366 819 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 CCNB1P14635 433 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 POLD2P49005 469 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 ZNF143P52747 638 aaPredicted RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 GTF2BQ00403 316 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 TAF5Q15542 800 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 AP5B1Q2VPB7 878 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 HLA-DQA1Q5Y7H0 255 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 SCARA3Q6AZY7 606 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 CYP20A1Q6UW02 462 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 RIOX2Q8IUF8 465 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 VAT1Q99536 393 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DGCR6LQ9BY27 220 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 FAM126AQ9BYI3 521 aaPredicted RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 IL22Q9GZX6 179 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 ADPRHL2Q9NX46 363 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 UXTQ9UBK9 157 aaPredicted RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 VPS51Q9UID3 782 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 NRCAMQ92823 1304 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 NWD1Q149M9 1564 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 ZNF839A8K0R7 811 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 FAM47E-STBD1D6RA91 191 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 MTA2O94776 668 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 CNPP09543 421 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 CRATP43155 626 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 UGCGQ16739 394 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 PCID2Q5JVF3 399 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 USP45Q70EL2 814 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 TTC7BQ86TV6 843 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 BTRCQ9Y297 605 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 TRIM24O15164 1050 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 NEK3P51956 506 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 FMO1Q01740 532 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 IKBKEQ14164 716 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 FRG1Q14331 258 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 EEF1DP3Q658K8 133 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 TNS4Q8IZW8 715 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 PGM2Q96G03 612 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 AHCYL2Q96HN2 611 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 SEMA3CQ99985 751 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 MLPHQ9BV36 600 aaPredicted RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 OSBPL6Q9BZF3 934 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 PAIP1Q9H074 479 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 NRDE2Q9H7Z3 1164 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 POLR1DQ9Y2S0 133 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 A0A1B0GW55 424 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 E7ENQ6 273 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms