RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 KCTD4Q8WVF5 259 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ASIC4Q96FT7 647 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 LENG8Q96PV6 779 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 B3GNT5Q9BYG0 378 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CNGB3Q9NQW8 809 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CAB39Q9Y376 341 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 PPP2R3BQ9Y5P8 575 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 C17orf102A2RUQ5 167 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 HACD1B0YJ81 288 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 DHX15O43143 795 aaKnown RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 RBP1P09455 135 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ODC1P11926 461 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 YBX3P16989 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 GOT1P17174 413 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ALOX12P18054 663 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CDH3P22223 829 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 GABRB2P47870 512 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 OR1G1P47890 313 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 PWP1Q13610 501 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 MGAT5BQ3V5L5 792 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 SPANXN3Q5MJ09 141 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 MFSD14CQ5VZR4 134 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 PIGZQ86VD9 579 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 DNAJB14Q8TBM8 379 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 FNIP1Q8TF40 1166 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 RORBQ92753 470 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 SEPT5Q99719 369 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ULBP1Q9BZM6 244 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 REXO4Q9GZR2 422 aaKnown RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 PCDH18Q9HCL0 1135 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 PNPLA3Q9NST1 481 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 TRNAU1APQ9NX07 287 aaKnown RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 IMPAD1Q9NX62 359 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 EFR3BQ9Y2G0 817 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 SH3GLB1Q9Y371 365 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 LRP6O75581 1613 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 SPTLC1O15269 473 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 NR4A1P22736 598 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 MPSTP25325 297 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CBX3Q13185 183 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 PPP1R26Q5T8A7 1209 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 SYTL1Q8IYJ3 562 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ADARB2Q9NS39 739 aaKnown RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 STK39Q9UEW8 545 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 LRRC42Q9Y546 428 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 SLC30A1Q9Y6M5 507 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ROBO1Q9Y6N7 1651 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 MAGEB16A2A368 324 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 TRIM38O00635 465 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CXCL11O14625 94 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ASNA1O43681 348 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 TOMM70O94826 608 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CFHP08603 1231 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 PCNAP12004 261 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ECHS1P30084 290 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 RAD23AP54725 363 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 GDF10P55107 478 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 SPIDRQ14159 915 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 C10orf120Q5SQS8 335 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 PACS1Q6VY07 963 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ATG16L2Q8NAA4 619 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF670Q9BS34 389 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 LHX5Q9H2C1 402 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 HMG20AQ9NP66 347 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 SNX15Q9NRS6 342 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 LIMD1Q9UGP4 676 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 POMPQ9Y244 141 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 EVPLLA8MZ36 301 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 SOAT2O75908 522 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 ARF4P18085 180 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-201ENST00000267199 ADORA2AP29274 412 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 SLC7A2P52569 658 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 ACTR3P61158 418 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 PLCL1Q15111 1095 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 CARTPTQ16568 116 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 ZRANB3Q5FWF4 1079 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 CENPLQ8N0S6 344 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-201ENST00000267199 BANPQ8N9N5 519 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.53
VPS33A-201ENST00000267199 OSCP1Q8WVF1 389 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF512Q96ME7 567 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-201ENST00000267199 PPP1R10Q96QC0 940 aaKnown RBP11.71□□□□□ -0.53
VPS33A-201ENST00000267199 CLK4Q9HAZ1 481 aaKnown RBP11.71□□□□□ -0.53
VPS33A-201ENST00000267199 NT5MQ9NPB1 228 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 PNMA8BQ9ULN7 279 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-201ENST00000267199 FAM32AQ9Y421 112 aaKnown RBP11.71□□□□□ -0.53
VPS33A-201ENST00000267199 BIRC5O15392 142 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 TGDSO95455 350 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 CPT1AP50416 773 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 GBE1Q04446 702 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 TWF1Q12792 350 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 TMEM63BQ5T3F8 832 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 MRNIPQ6NTE8 343 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 XYLT1Q86Y38 959 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 SLC41A1Q8IVJ1 513 aa11.71□□□□□ -0.53
VPS33A-201ENST00000267199 C7orf26Q96N11 449 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms