RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 UBA6A0AVT1 1052 aaPredicted RBP19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 RHOCP08134 193 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 ITGA2BP08514 1039 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 RPL34P49207 117 aaKnown RBP19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 GALNT2Q10471 571 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 TWF1Q12792 350 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 PIK3R6Q5UE93 754 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 SMYD5Q6GMV2 418 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 CYP2S1Q96SQ9 504 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 ATP13A1Q9HD20 1204 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 IGSF9Q9P2J2 1179 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 SCN10AQ9Y5Y9 1956 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 C2orf71A6NGG8 1288 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 TM9SF1O15321 606 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 MYL4P12829 197 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 DLG2Q15700 870 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 PDK4Q16654 411 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 FASTKD1Q53R41 847 aaKnown RBP19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 ZNF470Q6ECI4 717 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 OXNAD1Q96HP4 312 aaPredicted RBP19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 ZNF778Q96MU6 729 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 TLR6Q9Y2C9 796 aa19.04■□□□□ 0.64
SMARCC2-201ENST00000267064 GJB5O95377 273 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 HLA-DQB2P05538 268 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 EZRP15311 586 aaKnown RBP19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 ZNF135P52742 658 aaPredicted RBP19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 MS4A13Q5J8X5 152 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 NXNQ6DKJ4 435 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 TRIM42Q8IWZ5 723 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 AGGF1Q8N302 714 aaeCLIP19.03■□□□□ 0.645e-7■■□□□ 13
SMARCC2-201ENST00000267064 PNPLA1Q8N8W4 532 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 GRAMD1AQ96CP6 724 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 RTP4Q96DX8 246 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 PRDM16Q9HAZ2 1276 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 HSPA4LO95757 839 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 ACVRL1P37023 503 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 ERFP50548 548 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 SCAPQ12770 1279 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 ANK1P16157 1881 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 ZNF487B1APH4 448 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 DNAJC6O75061 913 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 HAPLN1P10915 354 aaPredicted RBP19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 SCTRP47872 440 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 EPHB3P54753 998 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 FAM189BP81408 668 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 SMAD3P84022 425 aaKnown RBP19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 SPANXN3Q5MJ09 141 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 IGSF8Q969P0 613 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 IL22Q9GZX6 179 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 ZNF358Q9NW07 568 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 MARCH5Q9NX47 278 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 UXTQ9UBK9 157 aaPredicted RBP19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 USH1CQ9Y6N9 552 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 ZSWIM8A7E2V4 1837 aa19.03■□□□□ 0.64
SMARCC2-201ENST00000267064 PITPNM1O00562 1244 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 PSMD3O43242 534 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 SP100P23497 879 aaPredicted RBP19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 TARSP26639 723 aaKnown RBP19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 HCAR3P49019 387 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 OXCT1P55809 520 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 EMC10Q5UCC4 262 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 TPGS1Q6ZTW0 290 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 OTOAQ7RTW8 1153 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 CNTD1Q8N815 330 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 GABPB2Q8TAK5 448 aaPredicted RBP19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 MTBPQ96DY7 904 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 NUDCD1Q96RS6 583 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 CINPQ9BW66 212 aaPredicted RBP19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 ACTR5Q9H9F9 607 aaPredicted RBP19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 MRPL17Q9NRX2 175 aaKnown RBP19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 ARHGEF38Q9NXL2 777 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 A0A096LPK6 155 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 LRG1P02750 347 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 GJA1P17302 382 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 BANPQ8N9N5 519 aa19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 ZNF395Q9H8N7 513 aaPredicted RBP19.02■□□□□ 0.64
SMARCC2-201ENST00000267064 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.02■□□□□ 0.645e-7■□□□□ 8.3
SMARCC2-201ENST00000267064 MATN3O15232 486 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 TSHRP16473 764 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 CCNCP24863 283 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 NPY2RP49146 381 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 PSEN1P49768 467 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 ESRP1Q6NXG1 681 aaKnown RBP19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 LINGO4Q6UY18 593 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 CDHR3Q6ZTQ4 885 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 NLRP9Q7RTR0 991 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 LDB1Q86U70 411 aaPredicted RBP19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 DDI1Q8WTU0 396 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 VPS28Q9UK41 221 aa19.02■□□□□ 0.63
SMARCC2-201ENST00000267064 PRPF4O43172 522 aaKnown RBP eCLIP19.01■□□□□ 0.634e-10■■■■■ 38.9
SMARCC2-201ENST00000267064 MLNP12872 115 aa19.01■□□□□ 0.63
SMARCC2-201ENST00000267064 HDCP19113 662 aa19.01■□□□□ 0.63
SMARCC2-201ENST00000267064 TACR2P21452 398 aa19.01■□□□□ 0.63
SMARCC2-201ENST00000267064 CORO1AP31146 461 aaKnown RBP19.01■□□□□ 0.63
SMARCC2-201ENST00000267064 CD68P34810 354 aaPredicted RBP19.01■□□□□ 0.63
SMARCC2-201ENST00000267064 CDH18Q13634 790 aa19.01■□□□□ 0.63
SMARCC2-201ENST00000267064 TRIP4Q15650 581 aaPredicted RBP19.01■□□□□ 0.63
SMARCC2-201ENST00000267064 ACCSLQ4AC99 568 aa19.01■□□□□ 0.63
SMARCC2-201ENST00000267064 MTDHQ86UE4 582 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms