RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SIKE1Q9BRV8 207 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 STN1Q9H668 368 aaKnown RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 ZNF112Q9UJU3 913 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 STXBP5LQ9Y2K9 1186 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 LCA5LO95447 670 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 ACADSP16219 412 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 RPA3P35244 121 aaPredicted RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 GLUD2P49448 558 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 AIF1P55008 147 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 SGCGQ13326 291 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 ACOX1Q15067 660 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 TRMT5Q32P41 509 aaKnown RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 OXNAD1Q96HP4 312 aaPredicted RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 NEUROG2Q9H2A3 272 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 COPS7BQ9H9Q2 264 aaPredicted RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 SNX13Q9Y5W8 968 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 ARL5CA6NH57 179 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 PAGE1O75459 146 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 PIRTP0C851 137 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 FMO4P31512 558 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 JAM2P57087 298 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 MRPS35P82673 323 aaKnown RBP15.63■□□□□ 0.09
TIMP3-201ENST00000266085 XRCC4Q13426 336 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 FBXL19Q6PCT2 694 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 MON1BQ7L1V2 547 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 GRIN3AQ8TCU5 1115 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 CATSPER2Q96P56 530 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 ZDHHC6Q9H6R6 413 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 CATSPERZQ9NTU4 200 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 SPACA6W5XKT8 324 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 RPTORQ8N122 1335 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 NAGLUP54802 743 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 CREMQ03060 361 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 OR56A4Q8NGH8 313 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 INPP5DQ92835 1189 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 THAP11Q96EK4 314 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 P2RY11Q96G91 374 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 MLPHQ9BV36 600 aaPredicted RBP15.63■□□□□ 0.09
TIMP3-201ENST00000266085 MSRAQ9UJ68 235 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 SALL4Q9UJQ4 1053 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 ADAM28Q9UKQ2 775 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 COG5Q9UP83 839 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 COQ4Q9Y3A0 265 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 TPP1O14773 563 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 BANF1O75531 89 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 CYP2A6P11509 494 aaPredicted RBP15.63■□□□□ 0.09
TIMP3-201ENST00000266085 SLC2A4P14672 509 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 MAPK8P45983 427 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 HSPA13P48723 471 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 ANXA11P50995 505 aaKnown RBP15.63■□□□□ 0.09
TIMP3-201ENST00000266085 IL2P60568 153 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 MORF4L1Q9UBU8 362 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 KATNA1O75449 491 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 TMEM154Q6P9G4 183 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 USP45Q70EL2 814 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 SLC26A9Q7LBE3 791 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 RD3Q7Z3Z2 195 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 RASGEF1CQ8N431 466 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 CKAP2Q8WWK9 683 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 PCDHGC3Q9UN70 934 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 R3HDM2Q9Y2K5 976 aaKnown RBP15.63■□□□□ 0.09
TIMP3-201ENST00000266085 SPEF2Q9C093 1822 aa15.63■□□□□ 0.09
TIMP3-201ENST00000266085 MYH2Q9UKX2 1941 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 A0A1W2PQH9 124 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 MOXD2PA6NHM9 499 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 PIGNO95427 931 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 ZNF23P17027 643 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 CYP3A5P20815 502 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 SNRPD1P62314 119 aaKnown RBP15.62■□□□□ 0.09
TIMP3-201ENST00000266085 TBL3Q12788 808 aaKnown RBP15.62■□□□□ 0.09
TIMP3-201ENST00000266085 MSLNQ13421 630 aaPredicted RBP15.62■□□□□ 0.09
TIMP3-201ENST00000266085 INTS6LQ5JSJ4 861 aaKnown RBP15.62■□□□□ 0.09
TIMP3-201ENST00000266085 SLC44A2Q8IWA5 706 aaPredicted RBP15.62■□□□□ 0.09
TIMP3-201ENST00000266085 ASB2Q96Q27 587 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 MYBPHLA2RUH7 354 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 MDM4O15151 490 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 ALOX15BO15296 676 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 FGFR1P11362 822 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 ACLYP53396 1101 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 CSPG4P5Q96PW8 444 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 DPY30Q9C005 99 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 FKBP6O75344 327 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 GLUD1P00367 558 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 DAB2P98082 770 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 SMARCB1Q12824 385 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 GRAMD4Q6IC98 578 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 RBM23Q86U06 439 aaKnown RBP15.62■□□□□ 0.09
TIMP3-201ENST00000266085 TMEM192Q8IY95 271 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 PIWIL2Q8TC59 973 aaKnown RBP15.62■□□□□ 0.09
TIMP3-201ENST00000266085 CENPTQ96BT3 561 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 DPEP3Q9H4B8 488 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 ERVK-5Q9HDB9 667 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 SCN3BQ9NY72 215 aa15.62■□□□□ 0.09
TIMP3-201ENST00000266085 DCXO43602 365 aa15.61■□□□□ 0.09
TIMP3-201ENST00000266085 SLC5A3P53794 718 aa15.61■□□□□ 0.09
TIMP3-201ENST00000266085 GBE1Q04446 702 aa15.61■□□□□ 0.09
TIMP3-201ENST00000266085 LRRC23Q53EV4 343 aaPredicted RBP15.61■□□□□ 0.09
TIMP3-201ENST00000266085 TTC7BQ86TV6 843 aa15.61■□□□□ 0.09
TIMP3-201ENST00000266085 BBS7Q8IWZ6 715 aa15.61■□□□□ 0.09
TIMP3-201ENST00000266085 FNDC5Q8NAU1 212 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms