RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CORO1CQ9ULV4 474 aaPredicted RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 WNT7AO00755 349 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 EIF2S1P05198 315 aaKnown RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 CKMP06732 381 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 PIRTP0C851 137 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 PRKAG1P54619 331 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 NRG1Q02297 640 aaPredicted RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 EVX2Q03828 476 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 ANKS6Q68DC2 871 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 KYAT3Q6YP21 454 aaKnown RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 HPS6Q86YV9 775 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 SYT12Q8IV01 421 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 KATNAL2Q8IYT4 538 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 ALLCQ8N6M5 410 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 CHST13Q8NET6 341 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 GPRC5AQ8NFJ5 357 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 SYTL5Q8TDW5 730 aaPredicted RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 NOL11Q9H8H0 719 aaKnown RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 ADPRHL2Q9NX46 363 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 IFNA14P01570 189 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 LRG1P02750 347 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 COX7A2P14406 83 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 TAS2R40P59535 323 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 YWHAZP63104 245 aaKnown RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 ARF5P84085 180 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 SNAPC2Q13487 334 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 PPP1R26Q5T8A7 1209 aaPredicted RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 CAMK1DQ8IU85 385 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 SETD9Q8NE22 299 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 CIPCQ9C0C6 399 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 LRATO95237 230 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 HPGDP15428 266 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 TNFRSF8P28908 595 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 DOK6Q6PKX4 331 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 RD3Q7Z3Z2 195 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 GALNT5Q7Z7M9 940 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 C4orf19Q8IY42 314 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 ZNF671Q8TAW3 534 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 CITED4Q96RK1 184 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 TINF2Q9BSI4 451 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 ADGRE3Q9BY15 652 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 EURLQ9NYK6 297 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 USP31Q70CQ4 1352 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 APOC4-APOC2K7ER74 178 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 PLOD3O60568 738 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 F9P00740 461 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 APOC2P02655 101 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 SLURP2P0DP57 97 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 S100A3P33764 101 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 RPL7AP62424 266 aaKnown RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 RALGDSQ12967 914 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 DUPD1Q68J44 220 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 GK5Q6ZS86 529 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 KIAA0408Q6ZU52 694 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 CMC1Q7Z7K0 106 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 CROCCP3Q8IVE0 287 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 ZC3H7AQ8IWR0 971 aaKnown RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 RTL3Q8N8U3 475 aaKnown RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 FAR1Q8WVX9 515 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 KIFC1Q9BW19 673 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 AGXT2Q9BYV1 514 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 REEP1Q9H902 201 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 ANKRD6Q9Y2G4 727 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 GMPPBQ9Y5P6 360 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 CCL15-CCL14A0A0B4J2E2 113 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 MAGEB16A2A368 324 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 KRT6AP02538 564 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 MT-ND1P03886 318 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 PAICSP22234 425 aaKnown RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 PPP4CP60510 307 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 CCL15Q16663 113 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 BROXQ5VW32 411 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 ABRAXAS1Q6UWZ7 409 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 FAM183BPQ6ZVS7 135 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 PTGR2Q8N8N7 351 aaPredicted RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 UBXN6Q9BZV1 441 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 RSPH9Q9H1X1 276 aaPredicted RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
SMG6-201ENST00000263073 TAS2R13Q9NYV9 303 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 CLEC4AQ9UMR7 237 aa12.22□□□□□ -0.45
SMG6-201ENST00000263073 PAPSS1O43252 624 aaPredicted RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 OR6B1O95007 311 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 SEMA3DO95025 777 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 SNRPB2P08579 225 aaKnown RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 YWHAQP27348 245 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 RPL5P46777 297 aaKnown RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 CTBP1Q13363 440 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 IQSEC1Q6DN90 963 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 GPSM1Q86YR5 675 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 ZNF483Q8TF39 744 aaPredicted RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 THP07101 528 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 NFKB1P19838 968 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 ALDH7A1P49419 539 aaKnown RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 SEPHS1P49903 392 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 PHKG1Q16816 387 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 POM121L1PQ3SYA9 428 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 FAM182AQ5T1J6 154 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms