RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 BCLAF3A2AJT9 711 aaKnown RBP13.22□□□□□ -0.29
SNX1-201ENST00000261889 E7ENX8 843 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 ACKR2O00590 384 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 ZBTB24O43167 697 aaPredicted RBP13.22□□□□□ -0.29
SNX1-201ENST00000261889 VAPBO95292 243 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 VDRP11473 427 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 TFEBP19484 476 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 YWHAQP27348 245 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 RPL5P46777 297 aaKnown RBP13.22□□□□□ -0.29
SNX1-201ENST00000261889 ENTPD1P49961 510 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 HPCAP84074 193 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
SNX1-201ENST00000261889 SH3D19Q5HYK7 790 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 RARS2Q5T160 578 aaKnown RBP13.22□□□□□ -0.29
SNX1-201ENST00000261889 ARCQ7LC44 396 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 RYBPQ8N488 228 aaPredicted RBP13.22□□□□□ -0.29
SNX1-201ENST00000261889 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 ACE2Q9BYF1 805 aaPredicted RBP13.22□□□□□ -0.29
SNX1-201ENST00000261889 PNPLA8Q9NP80 782 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 XPR1Q9UBH6 696 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 SLC2A6Q9UGQ3 507 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 PSMD13Q9UNM6 376 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 THSD7BQ9C0I4 1608 aa13.22□□□□□ -0.29
SNX1-201ENST00000261889 A0A0A0MRY4 1105 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 MX2P20592 715 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 NDST2P52849 883 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 PPIDQ08752 370 aaKnown RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 HNRNPDQ14103 355 aaKnown RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 EPGNQ6UW88 154 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 B3GNT6Q6ZMB0 384 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 SPATA13Q96N96 652 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 M0QYT0 321 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 BIRC5O15392 142 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 XPOTO43592 962 aaKnown RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 INSRRP14616 1297 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 TKTP29401 623 aaKnown RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 ARL4AP40617 200 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 PLOD1Q02809 727 aaPredicted RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 PTK2BQ14289 1009 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 OGFRL1Q5TC84 451 aaPredicted RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 ARHGAP36Q6ZRI8 547 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 NXNL1Q96CM4 212 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 CDHR1Q96JP9 859 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 KCNK16Q96T55 309 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 EIF2AQ9BY44 585 aaKnown RBP13.21□□□□□ -0.29
SNX1-201ENST00000261889 SIK2Q9H0K1 926 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 TMEM134Q9H6X4 195 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 EPS15L1Q9UBC2 864 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 CDC14AQ9UNH5 594 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 PHF24Q9UPV7 400 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 RNF11Q9Y3C5 154 aa13.21□□□□□ -0.29
SNX1-201ENST00000261889 I6L893 689 aaPredicted RBP13.21□□□□□ -0.3
SNX1-201ENST00000261889 NCAM1P13591 858 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 CASP2P42575 452 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 SEPT6Q14141 434 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 ADGRE1Q14246 886 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 LDLRAP1Q5SW96 308 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 SEL1L3Q68CR1 1132 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 KRT80Q6KB66 452 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 LRRC8EQ6NSJ5 796 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 KLRG1Q96E93 195 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 VPS39Q96JC1 886 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 NAA50Q9GZZ1 169 aaKnown RBP13.21□□□□□ -0.3
SNX1-201ENST00000261889 C1orf21Q9H246 121 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 RIMS3Q9UJD0 308 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 VANGL2Q9ULK5 521 aa13.21□□□□□ -0.3
SNX1-201ENST00000261889 COPG1Q9Y678 874 aaKnown RBP13.21□□□□□ -0.3
SNX1-201ENST00000261889 UNCXA6NJT0 531 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 POLBP06746 335 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 FAM58BPP0C7Q3 252 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 KCNA5P22460 613 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 GP5P40197 560 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 MAGEA3P43357 314 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 EFNA5P52803 228 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 CDH13P55290 713 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 LAMC2Q13753 1193 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 CAPRIN1Q14444 709 aaKnown RBP13.2□□□□□ -0.3
SNX1-201ENST00000261889 PRPSAP1Q14558 356 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 PCSK7Q16549 785 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 ZNF423Q2M1K9 1284 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 AAGABQ6PD74 315 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 CEP97Q8IW35 865 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 ZNF786Q8N393 782 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 NPWQ8N729 165 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 FAM47BQ8NA70 645 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 FERMT1Q9BQL6 677 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 DCDC2Q9UHG0 476 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 MCM3APO60318 1980 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 PPP6CO00743 305 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 B4GALT4O60513 344 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 TRIM13O60858 407 aa13.2□□□□□ -0.3
SNX1-201ENST00000261889 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
SNX1-201ENST00000261889 JCHAINP01591 159 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms