RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 RHOCP08134 193 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 HNRNPLP14866 589 aaKnown RBP eCLIP11.85□□□□□ -0.516e-6■□□□□ 11.3
PFDN1-201ENST00000261813 GOT1P17174 413 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 OR1E1P30953 314 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 HTR7P34969 479 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 ARSEP51690 589 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 TPI1P60174 286 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 SATB1Q01826 763 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 SLC12A1Q13621 1099 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 PPP2R5EQ16537 467 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 PPP6R3Q5H9R7 873 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-201ENST00000261813 SPEM1Q8N4L4 309 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 CCDC33Q8N5R6 958 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 ALLCQ8N6M5 410 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 RTL3Q8N8U3 475 aaKnown RBP11.85□□□□□ -0.51
PFDN1-201ENST00000261813 IL17RCQ8NAC3 791 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 CCDC26Q8TAB7 109 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 FAM71BQ8TC56 605 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 CYB5D2Q8WUJ1 264 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 PCDH18Q9HCL0 1135 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 EVA1BQ9NVM1 165 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 KLHL11Q9NVR0 708 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 SPATA6Q9NWH7 488 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-201ENST00000261813 CWC15Q9P013 229 aaKnown RBP11.85□□□□□ -0.51
PFDN1-201ENST00000261813 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-201ENST00000261813 MRFAP1Q9Y605 127 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 CFAP54Q96N23 3096 aa11.85□□□□□ -0.51
PFDN1-201ENST00000261813 MUC22E2RYF6 1773 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-201ENST00000261813 A0A0D9SEW6 157 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 WASH4PA8MWX3 477 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 ZNF487B1APH4 448 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 WASH3PC4AMC7 463 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 SGK1O00141 431 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 FGF10O15520 208 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 CEP104O60308 925 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 ADAM23O75077 832 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 KLF8O95600 359 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 CD48P09326 243 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 POLR2EP19388 210 aaKnown RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 NBL1P41271 181 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 IL12RB1P42701 662 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 CTSOP43234 321 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 MAPKAPK2P49137 400 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 PLK1P53350 603 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 CDH6P55285 790 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 OXCT1P55809 520 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 DPYSQ14117 519 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 DMC1Q14565 340 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 ZNF234Q14588 700 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 C6orf118Q5T5N4 469 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 RNF219Q5W0B1 726 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 RFX8Q6ZV50 586 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 ASCL5Q7RTU5 278 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 MAML2Q8IZL2 1156 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 RASGEF1CQ8N431 466 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 TXNDC5Q8NBS9 432 aaKnown RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 KCTD6Q8NC69 237 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 UCMAQ8WVF2 138 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 TSC1Q92574 1164 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 MYO19Q96H55 970 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 PSMB7Q99436 277 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 FEM1AQ9BSK4 669 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 RETREG1Q9H6L5 497 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 NOL6Q9H6R4 1146 aaKnown RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 CATSPERBQ9H7T0 1116 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 HOMER3Q9NSC5 361 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 CACNA2D2Q9NY47 1150 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 THAP10Q9P2Z0 257 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-201ENST00000261813 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
PFDN1-201ENST00000261813 DOCK4Q8N1I0 1966 aa11.83□□□□□ -0.51
PFDN1-201ENST00000261813 CACNA1HO95180 2353 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 GOLGA6L10A0A0M3HER8 536 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 ILVBLA1L0T0 632 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 PRR23AA6NEV1 266 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 PGRMC1O00264 195 aaKnown RBP11.83□□□□□ -0.52
PFDN1-201ENST00000261813 FANCGO15287 622 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 TIMM44O43615 452 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 ATG13O75143 517 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 TJP3O95049 919 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 KRT1P04264 644 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 DLDP09622 509 aaKnown RBP11.83□□□□□ -0.52
PFDN1-201ENST00000261813 ERCC2P18074 760 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 IL4RP24394 825 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 NTSR1P30989 418 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 PTPN7P35236 360 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 WASP42768 502 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 HCAR3P49019 387 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 DNA2P51530 1060 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 CCR3P51677 355 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 GNA12Q03113 381 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 ENPP2Q13822 863 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 KRT81Q14533 505 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 HSF5Q4G112 596 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-201ENST00000261813 ZNF783Q6ZMS7 281 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 SYT13Q7L8C5 426 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 TRMT11Q7Z4G4 463 aaKnown RBP11.83□□□□□ -0.52
PFDN1-201ENST00000261813 CREG2Q8IUH2 290 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 CCDC50Q8IVM0 306 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 C1orf210Q8IVY1 113 aa11.83□□□□□ -0.52
PFDN1-201ENST00000261813 CHPFQ8IZ52 775 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms