RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PIK3R1P27986 724 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 TKTP29401 623 aaKnown RBP14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 GRIA2P42262 883 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 MATKP42679 507 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 SERPINB8P50452 374 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 IQSEC1Q6DN90 963 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 PAOXQ6QHF9 649 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 TTC39CQ8N584 583 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 RNF34Q969K3 372 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 DNAJC1Q96KC8 554 aaKnown RBP14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 ADA2Q9NZK5 511 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 KPNA7A9QM74 516 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 THOP1P52888 689 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 MAP3K7CLP57077 242 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 LSM12Q3MHD2 195 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ANKRD20A4Q4UJ75 823 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ARL13AQ5H913 290 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 GRTP1Q5TC63 336 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 FBXL19Q6PCT2 694 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 KCNMB4Q86W47 210 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 PNPLA1Q8N8W4 532 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 EDEM1Q92611 657 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 VCX3AQ9NNX9 186 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 DNAJC28Q9NX36 388 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 FZD10Q9ULW2 581 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 PCDHB12Q9Y5F1 795 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ANKRD12Q6UB98 2062 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ZNF195O14628 629 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 PEX1O43933 1283 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 SETSIPP0DME0 302 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 SMIM10L2AP0DMW4 78 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 SMIM10L2BP0DMW5 78 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 NELFEP18615 380 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 GRIA4P48058 902 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 TPI1P60174 286 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 GK3PQ14409 553 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 STEAP4Q687X5 459 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 PGM2L1Q6PCE3 622 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 DSELQ8IZU8 1212 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 APPL2Q8NEU8 664 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 KCTD4Q8WVF5 259 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 RBBP8Q99708 897 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ACE2Q9BYF1 805 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 SIK2Q9H0K1 926 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ATXN3LQ9H3M9 355 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 DDX18Q9NVP1 670 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 C15orf38-AP3S2A0A0A6YYH1 394 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 TMEM233B4DJY2 109 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 SRGAP2BP0DMP2 458 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 MLNP12872 115 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ATN1P54259 1190 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 POU5F1BQ06416 359 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 LAMB3Q13751 1172 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 GRM3Q14832 879 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 C11orf91Q3C1V1 193 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ARMC3Q5W041 872 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 SEL1L3Q68CR1 1132 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 LAYNQ6UX15 382 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ARPINQ7Z6K5 226 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 KYQ8NBH2 561 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 JADE3Q92613 823 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 VPS39Q96JC1 886 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 NDNQ99608 321 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 GORASP1Q9BQQ3 440 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 NAT9Q9BTE0 207 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 PIGVQ9NUD9 493 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 ETAA1Q9NY74 926 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 DNAJB4Q9UDY4 337 aa14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 GNEQ9Y223 722 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 PIN4Q9Y237 131 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-201ENST00000261674 HUS1O60921 280 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 RTN3O95197 1032 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 JUNP05412 331 aaKnown RBP14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 IGFBP6P24592 240 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 NMBRP28336 390 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 CTBP1Q13363 440 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 CYLC2Q14093 348 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 CYTH1Q15438 398 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 CCDC153Q494R4 210 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 C9orf57Q5W0N0 161 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 PQLC1Q8N2U9 271 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 BHLHE22Q8NFJ8 381 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 NPAS2Q99743 824 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 SEMA6AQ9H2E6 1030 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 PTCH2Q9Y6C5 1203 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 THRAP10827 490 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 CYP2C9P11712 490 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 NCAM1P13591 858 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 TFEBP19484 476 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 NFKB1P19838 968 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 HARS2P49590 506 aaKnown RBP14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 CHN2P52757 468 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 ITGA7Q13683 1181 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 MFSD10Q14728 455 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 POU6F1Q14863 301 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 TLR1Q15399 786 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 NRF1Q16656 503 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 SLC25A52Q3SY17 297 aa14.72□□□□□ -0.05
SFSWAP-201ENST00000261674 RWDD4Q6NW29 188 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms