RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 FAM47BQ8NA70 645 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 REPS2Q8NFH8 660 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 CCDC167Q9P0B6 97 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 SFMBT1Q9UHJ3 866 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 MDM4O15151 490 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 TIPRLO75663 272 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 BCAS2O75934 225 aaPredicted RBP16.18■□□□□ 0.18
LMNB1-201ENST00000261366 CLIC3O95833 236 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 RPS12P25398 132 aaKnown RBP16.18■□□□□ 0.18
LMNB1-201ENST00000261366 GRTP1Q5TC63 336 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 FAM160B1Q5W0V3 765 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 EFCAB12Q6NXP0 572 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 POTEHQ6S545 545 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 ANKRD23Q86SG2 305 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.18■□□□□ 0.185e-8■■■■■ 60.8
LMNB1-201ENST00000261366 OR6B3Q8NGW1 331 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 RUVBL2Q9Y230 463 aaKnown RBP16.18■□□□□ 0.18
LMNB1-201ENST00000261366 MGAMO43451 1857 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 FAM149AA5PLN7 773 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 UGT1A6P19224 532 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 LIMK2P53671 638 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 RPL26P61254 145 aaKnown RBP16.17■□□□□ 0.18
LMNB1-201ENST00000261366 NAA20P61599 178 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 NME3Q13232 169 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 GRM3Q14832 879 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 DPYSL2Q16555 572 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 RBM12BQ8IXT5 1001 aaKnown RBP16.17■□□□□ 0.18
LMNB1-201ENST00000261366 ZNF786Q8N393 782 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 IL1RL2Q9HB29 575 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 CYP4F12Q9HCS2 524 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 PTPRHQ9HD43 1115 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 TLK1Q9UKI8 766 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 NEMP2A6NFY4 417 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 ZNF839A8K0R7 811 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 GNAO1P09471 354 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 PLOD1Q02809 727 aaPredicted RBP16.17■□□□□ 0.18
LMNB1-201ENST00000261366 MPP3Q13368 585 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 MXD4Q14582 209 aaPredicted RBP16.17■□□□□ 0.18
LMNB1-201ENST00000261366 USP10Q14694 798 aaKnown RBP16.17■□□□□ 0.18
LMNB1-201ENST00000261366 TMEM132DQ14C87 1099 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 SLC10A6Q3KNW5 377 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 ZNF554Q86TJ5 538 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 ZNF280CQ8ND82 737 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 RMND5BQ96G75 393 aaPredicted RBP16.17■□□□□ 0.18
LMNB1-201ENST00000261366 VPS39Q96JC1 886 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 TRPC7Q9HCX4 862 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 OXSMQ9NWU1 459 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 VANGL2Q9ULK5 521 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 CDC14AQ9UNH5 594 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 CLEC11AQ9Y240 323 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 RAP2CQ9Y3L5 183 aa16.17■□□□□ 0.18
LMNB1-201ENST00000261366 ACOT8O14734 319 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 PTPRAP18433 802 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 RABGGTBP53611 331 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 NME5P56597 212 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 IKBKEQ14164 716 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 KIZQ2M2Z5 673 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 METTL21CQ5VZV1 264 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 LRRC8EQ6NSJ5 796 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 DLK2Q6UY11 383 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 RNF135Q8IUD6 432 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 HERC6Q8IVU3 1022 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 CHERPQ8IWX8 916 aaKnown RBP16.16■□□□□ 0.18
LMNB1-201ENST00000261366 PNPLA1Q8N8W4 532 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 SEPT1Q8WYJ6 367 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 COPS5Q92905 334 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 HAUS8Q9BT25 410 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 THEGQ9P2T0 379 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 GMEB1Q9Y692 573 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 TLL2Q9Y6L7 1015 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 CENPFP49454 3210 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 TCAF2A6NFQ2 919 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 ARIH2O95376 493 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 H6PDO95479 791 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 PSME3P61289 254 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 KCNMB4Q86W47 210 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 SULF1Q8IWU6 871 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 LPGAT1Q92604 370 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 KIF12Q96FN5 646 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 R3HDMLQ9H3Y0 253 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 ZBTB26Q9HCK0 441 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 DPP3Q9NY33 737 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 PLK2Q9NYY3 685 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 BCAP29Q9UHQ4 241 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 AURKCQ9UQB9 309 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 MYRFQ9Y2G1 1151 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 A0A087WZ62 844 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 AKAP10O43572 662 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 PROZP22891 400 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 PLK1P53350 603 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 SLC5A3P53794 718 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 ZNF280DQ6N043 979 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 SLC41A1Q8IVJ1 513 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 RNF169Q8NCN4 708 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 FDXACB1Q9BRP7 624 aaPredicted RBP16.16■□□□□ 0.18
LMNB1-201ENST00000261366 CIDEBQ9UHD4 219 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 NME7Q9Y5B8 376 aa16.16■□□□□ 0.18
LMNB1-201ENST00000261366 C9JVG2 144 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 NRP1O14786 923 aa16.15■□□□□ 0.18
LMNB1-201ENST00000261366 ZFXP17010 805 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms