RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 GIMAP2Q9UG22 337 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 EGFL7Q9UHF1 273 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 SFMBT1Q9UHJ3 866 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 HDAC3O15379 428 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 BEST1O76090 585 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 TPI1P60174 286 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 ITKQ08881 620 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 PAN2Q504Q3 1202 aaKnown RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 ZNF786Q8N393 782 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 DRAXINQ8NBI3 349 aaPredicted RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 FAM110BQ8TC76 370 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 SLC35F5Q8WV83 523 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 RTKNQ9BST9 563 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 NXF3Q9H4D5 531 aaKnown RBP17.16■□□□□ 0.34
SGPP1-201ENST00000247225 SMARCAD1Q9H4L7 1026 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 EFCAB1Q9HAE3 211 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 STK39Q9UEW8 545 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 SORCS3Q9UPU3 1222 aa17.16■□□□□ 0.34
SGPP1-201ENST00000247225 C9IYK1 514 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 ZNF195O14628 629 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 NCAM1P13591 858 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 ARL1P40616 181 aaPredicted RBP17.15■□□□□ 0.34
SGPP1-201ENST00000247225 GJA9P57773 515 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 PLIN5Q00G26 463 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 NIPAL4Q0D2K0 466 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 CELF3Q5SZQ8 465 aaKnown RBP17.15■□□□□ 0.34
SGPP1-201ENST00000247225 DNERQ8NFT8 737 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 SETD4Q9NVD3 440 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 RBBP6Q7Z6E9 1792 aaKnown RBP17.15■□□□□ 0.34
SGPP1-201ENST00000247225 PDLIM1O00151 329 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 TMEM259Q4ZIN3 620 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 NOMO2Q5JPE7 1267 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 CPNE9Q8IYJ1 553 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 FSTL5Q8N475 847 aaPredicted RBP17.15■□□□□ 0.34
SGPP1-201ENST00000247225 RBBP8Q99708 897 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 CPNE1Q99829 537 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 DDIT4Q9NX09 232 aa17.15■□□□□ 0.34
SGPP1-201ENST00000247225 TSR3Q9UJK0 312 aaKnown RBP17.15■□□□□ 0.34
SGPP1-201ENST00000247225 G3V2L1 256 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 HBP1O60381 514 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.34
SGPP1-201ENST00000247225 SMIM18P0DKX4 95 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 CNTFP26441 200 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 ADARP55265 1226 aaKnown RBP17.14■□□□□ 0.34
SGPP1-201ENST00000247225 ENPEPQ07075 957 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 GRTP1Q5TC63 336 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 ARHGAP17Q68EM7 881 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 RNF169Q8NCN4 708 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 EPS15L1Q9UBC2 864 aa17.14■□□□□ 0.34
SGPP1-201ENST00000247225 ANKRD33BA6NCL7 494 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 C19orf81C9J6K1 198 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 MDM4O15151 490 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 RGS2P41220 211 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 STT3AP46977 705 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 DPYSL2Q16555 572 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 FAM91A1Q658Y4 838 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 LPCAT2Q7L5N7 544 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 MORF4L1Q9UBU8 362 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 CROCCQ5TZA2 2017 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 FBXO21O94952 628 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 MOCS2O96007 188 aaPredicted RBP17.14■□□□□ 0.33
SGPP1-201ENST00000247225 CDH13P55290 713 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 ADGRE1Q14246 886 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 KIF19Q2TAC6 998 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 CLEC6AQ6EIG7 209 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 CHST13Q8NET6 341 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 TXNRD2Q9NNW7 524 aa17.14■□□□□ 0.33
SGPP1-201ENST00000247225 IGKV6D-21A0A0A0MT36 114 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 RNF103-CHMP3A0A140T963 221 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 E7ENX8 843 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 TNFAIP8O95379 198 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 CACNB2Q08289 660 aaPredicted RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 VGLL4Q14135 290 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 C16orf72Q14CZ0 275 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 CCDC153Q494R4 210 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 CHST15Q7LFX5 561 aaPredicted RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 DEFB132Q7Z7B7 95 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 NUP93Q8N1F7 819 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 NAT16Q8N8M0 369 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 TSPAN14Q8NG11 270 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 FBRSL1Q9HCM7 1045 aaKnown RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 DNAJB4Q9UDY4 337 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 DOLKQ9UPQ8 538 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 NRP1O14786 923 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 IL1BP01584 269 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 ICAM3P32942 547 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 MCCD1P59942 119 aaPredicted RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 GRM1Q13255 1194 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 CLVS1Q8IUQ0 354 aaPredicted RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 ACMSDQ8TDX5 336 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 PRICKLE1Q96MT3 831 aaPredicted RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 CDHR5Q9HBB8 845 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 PIGVQ9NUD9 493 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 ERAP1Q9NZ08 941 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 SLC2A6Q9UGQ3 507 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms