RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TMEM216Q9P0N5 145 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 MARCOQ9UEW3 520 aaPredicted RBP22.31■■□□□ 1.16
RNF39-201ENST00000244360 NUP205Q92621 2012 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 DNAH12Q6ZR08 3092 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 F8W810 466 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 GRK2P25098 689 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 YY1P25490 414 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 RCN2Q14257 317 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 CCDC153Q494R4 210 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 FSTL4Q6MZW2 842 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 RWDD4Q6NW29 188 aaKnown RBP22.31■■□□□ 1.16
RNF39-201ENST00000244360 SCD5Q86SK9 330 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 LINC00523Q86TU6 105 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 SPATA2LQ8IUW3 424 aaPredicted RBP22.31■■□□□ 1.16
RNF39-201ENST00000244360 LZTR1Q8N653 840 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 OR6Y1Q8NGX8 325 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 PIWIL2Q8TC59 973 aaKnown RBP22.31■■□□□ 1.16
RNF39-201ENST00000244360 KIFC1Q9BW19 673 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 COPG2Q9UBF2 871 aa22.31■■□□□ 1.16
RNF39-201ENST00000244360 SHROOM3Q8TF72 1996 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 DPPA5A6NC42 116 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 ITM2AO43736 263 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 PAGE1O75459 146 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 KITP10721 976 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 KCNA4P22459 653 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 PRKCZQ05513 592 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 PPP2R5DQ14738 602 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 BTBD8Q5XKL5 378 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 CMC1Q7Z7K0 106 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 CLEC14AQ86T13 490 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 KCNMB4Q86W47 210 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 ULK2Q8IYT8 1036 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 IL12RB2Q99665 862 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 APOL2Q9BQE5 337 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 ATP9BO43861 1147 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 SRGAP2BP0DMP2 458 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 CCND3P30281 292 aaPredicted RBP22.3■■□□□ 1.16
RNF39-201ENST00000244360 CCR1P32246 355 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 SLC1A6P48664 564 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 CDK7P50613 346 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 ALDH18A1P54886 795 aaKnown RBP22.3■■□□□ 1.16
RNF39-201ENST00000244360 ACTR3P61158 418 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 AP2B1P63010 937 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 HSP90AA5PQ58FG0 334 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 TMEM154Q6P9G4 183 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 C10orf107Q8IVU9 208 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 CHRAC1Q9NRG0 131 aa22.3■■□□□ 1.16
RNF39-201ENST00000244360 TIMM44O43615 452 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 KLHL2O95198 593 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 MPOP05164 745 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 PGFP49763 221 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 YWHAHQ04917 246 aaPredicted RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 KDSRQ06136 332 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 MPP3Q13368 585 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 GSTA3Q16772 222 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 ARHGAP36Q6ZRI8 547 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 OTOP3Q7RTS5 596 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 ATPAF2Q8N5M1 289 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 DTX3LQ8TDB6 740 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 CASP10Q92851 521 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 FCRL5Q96RD9 977 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 ZNF184Q99676 751 aaPredicted RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 SIK2Q9H0K1 926 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 CATSPERBQ9H7T0 1116 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 TRMT13Q9NUP7 481 aaKnown RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 SCOCQ9UIL1 159 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 DNAJC16Q9Y2G8 782 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 AAR2Q9Y312 384 aaKnown RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 FNDC1Q4ZHG4 1894 aaPredicted RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 B4GALT3O60512 393 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 MAFKO60675 156 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 LYPLA1O75608 230 aaPredicted RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 CSRP3P50461 194 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 MXRA7P84157 204 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 NRG1Q02297 640 aaPredicted RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 AFMIDQ63HM1 303 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 MYLK4Q86YV6 388 aaPredicted RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 AZIN2Q96A70 460 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 ZNF419Q96HQ0 510 aaPredicted RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 SORT1Q99523 831 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 C20orf96Q9NUD7 363 aaPredicted RBP22.29■■□□□ 1.16
RNF39-201ENST00000244360 TLL2Q9Y6L7 1015 aa22.29■■□□□ 1.16
RNF39-201ENST00000244360 PRR5-ARHGAP8B1AHC4 643 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 DFFAO00273 331 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 FKBP6O75344 327 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 MYL4P12829 197 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 TPH1P17752 444 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 HARS2P49590 506 aaKnown RBP22.28■■□□□ 1.16
RNF39-201ENST00000244360 ARHGAP8P85298 464 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 DSC1Q08554 894 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 TUBB3Q13509 450 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 RIPOR1Q6ZS17 1223 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 PCSK9Q8NBP7 692 aaKnown RBP22.28■■□□□ 1.16
RNF39-201ENST00000244360 FCRL2Q96LA5 508 aaPredicted RBP22.28■■□□□ 1.16
RNF39-201ENST00000244360 UBP1Q9NZI7 540 aa22.28■■□□□ 1.16
RNF39-201ENST00000244360 KCNU1A8MYU2 1149 aa22.27■■□□□ 1.16
RNF39-201ENST00000244360 MATN3O15232 486 aa22.27■■□□□ 1.16
RNF39-201ENST00000244360 MSI1O43347 362 aaKnown RBP22.27■■□□□ 1.16
RNF39-201ENST00000244360 CPA3P15088 417 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms