RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 WDR18Q9BV38 432 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 FHDC1Q9C0D6 1143 aaPredicted RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 FBXO44Q9H4M3 255 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ALDH2P05091 517 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 LTA4HP09960 611 aaKnown RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 COX7A2P14406 83 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 TAS2R40P59535 323 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 MFSD10Q14728 455 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ZNF618Q5T7W0 954 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 SCIMPQ6UWF3 145 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 TNS4Q8IZW8 715 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 TRIM8Q9BZR9 551 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 OPTCQ9UBM4 332 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 KLQ9UEF7 1012 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 TSPAN19P0C672 248 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ETS2P15036 469 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ACOX1Q15067 660 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ECM1Q16610 540 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 FBXW8Q8N3Y1 598 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 CERS2Q96G23 380 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 NFKBIZQ9BYH8 718 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 AAASQ9NRG9 546 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 IFRD1O00458 451 aaPredicted RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 CYP1A1P04798 512 aaPredicted RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 OR56A5P0C7T3 313 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ST13P50502 369 aaKnown RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 ATN1P54259 1190 aaPredicted RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 DOK6Q6PKX4 331 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 DHDDSQ86SQ9 333 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 TSPAN14Q8NG11 270 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 DLG3Q92796 817 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 PLEKHG4BQ96PX9 1271 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 PDGFDQ9GZP0 370 aaPredicted RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 LRRC19Q9H756 370 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ARHGEF3Q9NR81 526 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 RRN3Q9NYV6 651 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 REXO2Q9Y3B8 237 aaKnown RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 C2orf71A6NGG8 1288 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 NELFEP18615 380 aaKnown RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 NUP62P37198 522 aaPredicted RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 C10orf107Q8IVU9 208 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 EIF1ADQ8N9N8 165 aaKnown RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 BPIFA1Q9NP55 256 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 ZNF624Q9P2J8 865 aaPredicted RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 RBAK-RBAKDNI3L0D1 243 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 WNT7AO00755 349 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 YWHAQP27348 245 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 GPR15P49685 360 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 EVX2Q03828 476 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 SREBF2Q12772 1141 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 NEK10Q6ZWH5 1172 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 FAM71AQ8IYT1 594 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 C19orf60Q96EN9 201 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PRKAG3Q9UGI9 489 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 BTNL10A8MVZ5 291 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PSMD10O75832 226 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 EPN2O95208 641 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 MYL12AP19105 171 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 NFKB1P19838 968 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 RPL7AP62424 266 aaKnown RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 PRKCQQ04759 706 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 SQLEQ14534 574 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 GRIK5Q16478 980 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PHKG1Q16816 387 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PCID2Q5JVF3 399 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 RBM44Q6ZP01 1051 aaKnown RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 CACUL1Q86Y37 369 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PTGR2Q8N8N7 351 aaPredicted RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 IL22Q9GZX6 179 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 OR12D3Q9UGF7 316 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PABPC1P11940 636 aaKnown RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 CRY1Q16526 586 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 NEPROQ6NW34 567 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 RD3Q7Z3Z2 195 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PORCNQ9H237 461 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 UBA2Q9UBT2 640 aaPredicted RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 NDUFB5O43674 189 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 ITGAVP06756 1048 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 SNRPB2P08579 225 aaKnown RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 CYP3A4P08684 503 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 LBPP18428 481 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 CRATP43155 626 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PSME3P61289 254 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 CXCL9Q07325 125 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 MSLNQ13421 630 aaPredicted RBP13.55□□□□□ -0.24
NEK4-201ENST00000233027 SLC15A2Q16348 729 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 SPANXN2Q5MJ10 180 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 FAM84AQ96KN4 292 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 PHACTR1Q9C0D0 580 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 ERVK-5Q9HDB9 667 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 SLC17A7Q9P2U7 560 aa13.55□□□□□ -0.24
NEK4-201ENST00000233027 RECQL4O94761 1208 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 IL12RB1P42701 662 aa13.54□□□□□ -0.24
NEK4-201ENST00000233027 ZNF143P52747 638 aaPredicted RBP13.54□□□□□ -0.24
NEK4-201ENST00000233027 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
NEK4-201ENST00000233027 NFE2Q16621 373 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms