RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KCTD11Q693B1 232 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 DSELQ8IZU8 1212 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 ZNF560Q96MR9 790 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 ACE2Q9BYF1 805 aaPredicted RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 RRAGCQ9HB90 399 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 DMAP1Q9NPF5 467 aaPredicted RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 UBP1Q9NZI7 540 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 FLRT1Q9NZU1 646 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 PSMD13Q9UNM6 376 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 ZNF638Q14966 1978 aaKnown RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 FBXO21O94952 628 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 MSX2P35548 267 aaPredicted RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 GRIA4P48058 902 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 TAF6P49848 677 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 RPL14P50914 215 aaKnown RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 CHN2P52757 468 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 TPI1P60174 286 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 SOX4Q06945 474 aaPredicted RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 ZBTB17Q13105 803 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 PPP2R5DQ14738 602 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 SEL1L3Q68CR1 1132 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 UGT2A3Q6UWM9 527 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 C16orf89Q6UX73 402 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 PDZD4Q76G19 769 aaPredicted RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 SIX6OS1Q8N1H7 587 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 PQLC1Q8N2U9 271 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 NPWQ8N729 165 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 NCSTNQ92542 709 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 CDRT15Q96T59 188 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 HNRNPABQ99729 332 aaKnown RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 NUF2Q9BZD4 464 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 ZCWPW1Q9H0M4 648 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 GNEQ9Y223 722 aaKnown RBP17.58■□□□□ 0.4
USB1-201ENST00000219281 RAP2CQ9Y3L5 183 aa17.58■□□□□ 0.4
USB1-201ENST00000219281 I6L893 689 aaPredicted RBP17.57■□□□□ 0.4
USB1-201ENST00000219281 HDAC3O15379 428 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 GPR32O75388 356 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 RTN3O95197 1032 aaPredicted RBP17.57■□□□□ 0.4
USB1-201ENST00000219281 PIGNO95427 931 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 NPR3P17342 541 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 NFKB1P19838 968 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 NMBRP28336 390 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 CSE1LP55060 971 aaKnown RBP17.57■□□□□ 0.4
USB1-201ENST00000219281 PPIDQ08752 370 aaKnown RBP17.57■□□□□ 0.4
USB1-201ENST00000219281 BIRC2Q13490 618 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 FRG1Q14331 258 aaKnown RBP17.57■□□□□ 0.4
USB1-201ENST00000219281 KYQ8NBH2 561 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 LENG1Q96BZ8 264 aaPredicted RBP17.57■□□□□ 0.4
USB1-201ENST00000219281 SCYL1Q96KG9 808 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 BTBD9Q96Q07 612 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 SLC2A13Q96QE2 648 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 SERPINI1Q99574 410 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 DNAI2Q9GZS0 605 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 DRC3Q9H069 523 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 GBA3Q9H227 469 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 TLK1Q9UKI8 766 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 PRPF19Q9UMS4 504 aaKnown RBP17.57■□□□□ 0.4
USB1-201ENST00000219281 DNAH12Q6ZR08 3092 aa17.57■□□□□ 0.4
USB1-201ENST00000219281 NRP1O14786 923 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 CFLARO15519 480 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 PHGDHO43175 533 aaKnown RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 SBK3P0C264 359 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 PABPC4LP0CB38 370 aaKnown RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 AVPR1AP37288 418 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 GLRBP48167 497 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 TKTL1P51854 596 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 THOP1P52888 689 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 CYLC2Q14093 348 aaPredicted RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 TLR1Q15399 786 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 ARL13AQ5H913 290 aaPredicted RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 MORN1Q5T089 497 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 ZYG11AQ6WRX3 759 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 PAQR9Q6ZVX9 377 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 SATL1Q86VE3 508 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.56■□□□□ 0.4
USB1-201ENST00000219281 DCUN1D1Q96GG9 259 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 CNDP1Q96KN2 507 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 MCMBPQ9BTE3 642 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 MED10Q9BTT4 135 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 C6orf203Q9P0P8 240 aaPredicted RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 ZDHHC2Q9UIJ5 367 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 C15orf38-AP3S2A0A0A6YYH1 394 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 MAGEB16A2A368 324 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 GRID2O43424 1007 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 FYNP06241 537 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 TFEBP19484 476 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 NPY2RP49146 381 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 NAGLUP54802 743 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 MAP3K7CLP57077 242 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 RPL26P61254 145 aaKnown RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 MRPS22P82650 360 aaKnown RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 ANO4Q32M45 955 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 LIPMQ5VYY2 423 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 TMEM198Q66K66 360 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 BNC2Q6ZN30 1099 aaPredicted RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 CLEC20AQ6ZU45 233 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 ARPINQ7Z6K5 226 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 TMEM151AQ8N4L1 468 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms