RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 BRD8Q9H0E9 1235 aa27.79■■■□□ 2.04
CHMP4B-201ENST00000217402 RBM12Q9NTZ6 932 aaKnown RBP27.79■■■□□ 2.04
CHMP4B-201ENST00000217402 SEPT10Q9P0V9 454 aa27.79■■■□□ 2.04
CHMP4B-201ENST00000217402 UBA2Q9UBT2 640 aaPredicted RBP27.79■■■□□ 2.04
CHMP4B-201ENST00000217402 ZSCAN5CA6NGD5 496 aaPredicted RBP27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 K7ERQ8 282 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 KCNK1O00180 336 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 CCNCP24863 283 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 FAM182AQ5T1J6 154 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 TIGD7Q6NT04 549 aaPredicted RBP27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 ATP11CQ8NB49 1132 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 FRMD8P1Q9BZ68 369 aaPredicted RBP27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 TBC1D17Q9HA65 648 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 HCN2Q9UL51 889 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 PLA2G4CQ9UP65 541 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 MRPS17Q9Y2R5 130 aaKnown RBP27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 MRFAP1Q9Y605 127 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 KANSL1LA0AUZ9 987 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 HACD1B0YJ81 288 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 STK25O00506 426 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 CD160O95971 181 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 TARSP26639 723 aaKnown RBP27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 SERPINH1P50454 418 aaKnown RBP27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 BYSLQ13895 437 aaKnown RBP27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 CCINQ13939 588 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 CCNG2Q16589 344 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 MRGPRX3Q96LB0 322 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 LTB4R2Q9NPC1 389 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 SLCO3A1Q9UIG8 710 aa27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 MTF2Q9Y483 593 aaPredicted RBP27.78■■■□□ 2.04
CHMP4B-201ENST00000217402 PEX11BO96011 259 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 RBL1P28749 1068 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 TIE1P35590 1138 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 CLCN6P51797 869 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 GEMIN4P57678 1058 aaKnown RBP27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 SIGLEC14Q08ET2 396 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 FNDC3BQ53EP0 1204 aaKnown RBP27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 C2orf27AQ580R0 203 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 HEATR6Q6AI08 1181 aaKnown RBP27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 ZNF513Q8N8E2 541 aaPredicted RBP27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 USP33Q8TEY7 942 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 NSMCE1Q8WV22 266 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 EDAQ92838 391 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 TMEM121Q9BTD3 319 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 HS3ST2Q9Y278 367 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 FCF1Q9Y324 198 aaKnown RBP27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 STARD13Q9Y3M8 1113 aa27.77■■■□□ 2.04
CHMP4B-201ENST00000217402 SHROOM3Q8TF72 1996 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 MATN3O15232 486 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 SMAD6O43541 496 aaKnown RBP27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 SRCP12931 536 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 KIR2DL1P43626 348 aaPredicted RBP27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 ST8SIA6P61647 398 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 SLC10A7Q0GE19 358 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 ZNF234Q14588 700 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 WHAMMP3Q1A5X7 153 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 TMCO4Q5TGY1 634 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 NKD2Q969F2 451 aaPredicted RBP27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 MAGOHBQ96A72 148 aaKnown RBP27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 ACOX2Q99424 681 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 CEP41Q9BYV8 373 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 HOMER3Q9NSC5 361 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 ZNF148Q9UQR1 794 aa27.76■■■□□ 2.03
CHMP4B-201ENST00000217402 RNF40O75150 1001 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 TMCC1O94876 653 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 SRPRAP08240 638 aaKnown RBP27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 ZNF33AQ06730 810 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 LBRQ14739 615 aaKnown RBP27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 OASLQ15646 514 aaKnown RBP27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 ACCSLQ4AC99 568 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 SH2D3CQ8N5H7 860 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 ZNF366Q8N895 744 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 HTR3CQ8WXA8 447 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 MYO19Q96H55 970 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 ZNF599Q96NL3 588 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 CACNA2D2Q9NY47 1150 aa27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 THAP10Q9P2Z0 257 aaPredicted RBP27.75■■■□□ 2.03
CHMP4B-201ENST00000217402 BCLAF3A2AJT9 711 aaKnown RBP27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 FAM170BA6NMN3 283 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 KCNN4O15554 427 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 PHF2O75151 1096 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 CCNB1P14635 433 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 NNMTP40261 264 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 KCNJ1P48048 391 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 CKAP4Q07065 602 aaKnown RBP27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 SLC20A2Q08357 652 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 ZBTB17Q13105 803 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 SERPINA13PQ6UXR4 307 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 ZNF687Q8N1G0 1237 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 MAML1Q92585 1016 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 ZNF419Q96HQ0 510 aaPredicted RBP27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 CCDC114Q96M63 670 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 TTC34A8MYJ7 566 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 CHRNB1P11230 501 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 WASP42768 502 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 NRLP54845 237 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 TUBB2AQ13885 445 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 CYP1B1Q16678 543 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 FBXO43Q4G163 708 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 MARC1Q5VT66 337 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms