RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 TRMT2BQ96GJ1 504 aaKnown RBP17.72■□□□□ 0.43
VRK1-201ENST00000216639 APOL2Q9BQE5 337 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 PLCD4Q9BRC7 762 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 FSD1LQ9BXM9 530 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 UGT1A7Q9HAW7 530 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 UGT1A10Q9HAW8 530 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 UGT1A8Q9HAW9 530 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 MKS1Q9NXB0 559 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 MAFFQ9ULX9 164 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 SOX13Q9UN79 622 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 USP15Q9Y4E8 981 aaPredicted RBP17.72■□□□□ 0.43
VRK1-201ENST00000216639 YIPF1Q9Y548 306 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 PRRG1O14668 218 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 ACSL4O60488 711 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 ADRA1DP25100 572 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 OR1E1P30953 314 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 CCNFP41002 786 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 CREMQ03060 361 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 MPP3Q13368 585 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 BMPR2Q13873 1038 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 ANKRD20A4Q4UJ75 823 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 CERCAMQ5T4B2 595 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 RNF187Q5TA31 235 aaPredicted RBP17.72■□□□□ 0.43
VRK1-201ENST00000216639 MROH9Q5TGP6 573 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 PACS1Q6VY07 963 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 SPATA21Q7Z572 469 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 NECAB2Q7Z6G3 386 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 CCDC117Q8IWD4 279 aaPredicted RBP17.72■□□□□ 0.43
VRK1-201ENST00000216639 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.72■□□□□ 0.43
VRK1-201ENST00000216639 IPMKQ8NFU5 416 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 SPATA22Q8NHS9 363 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 YME1L1Q96TA2 773 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 CPNE1Q99829 537 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 ZMYND15Q9H091 742 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.72■□□□□ 0.43
VRK1-201ENST00000216639 TRIM43BA6NCK2 446 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 RFPL1O75677 317 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 HMGA1P17096 107 aaKnown RBP17.71■□□□□ 0.43
VRK1-201ENST00000216639 GP5P40197 560 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 IL10RBQ08334 325 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 GRTP1Q5TC63 336 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 UNC5BQ8IZJ1 945 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 LGI2Q8N0V4 545 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 ACMSDQ8TDX5 336 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 TRIM43Q96BQ3 446 aaPredicted RBP17.71■□□□□ 0.43
VRK1-201ENST00000216639 SRPK1Q96SB4 655 aaKnown RBP17.71■□□□□ 0.43
VRK1-201ENST00000216639 SLC25A51Q9H1U9 297 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 MRPL17Q9NRX2 175 aaKnown RBP17.71■□□□□ 0.43
VRK1-201ENST00000216639 SLC17A7Q9P2U7 560 aa17.71■□□□□ 0.43
VRK1-201ENST00000216639 UXTQ9UBK9 157 aaPredicted RBP17.71■□□□□ 0.43
VRK1-201ENST00000216639 MT-CYBP00156 380 aaPredicted RBP17.7■□□□□ 0.42
VRK1-201ENST00000216639 ERVK-10P10266 1014 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 KCNQ1P51787 676 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 C5orf22Q49AR2 442 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 PCID2Q5JVF3 399 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 RABGAP1LQ5R372 815 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 ARMC3Q5W041 872 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 NADSYN1Q6IA69 706 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 CES3Q6UWW8 571 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 TMCO2Q7Z6W1 182 aaPredicted RBP17.7■□□□□ 0.42
VRK1-201ENST00000216639 GPR65Q8IYL9 337 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 AZIN2Q96A70 460 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 PABPC5Q96DU9 382 aaKnown RBP17.7■□□□□ 0.42
VRK1-201ENST00000216639 FCRL3Q96P31 734 aaPredicted RBP17.7■□□□□ 0.42
VRK1-201ENST00000216639 FICDQ9BVA6 458 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 KIFC1Q9BW19 673 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 HAUS2Q9NVX0 235 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 GRID1Q9ULK0 1009 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 STARD13Q9Y3M8 1113 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 PCDHB12Q9Y5F1 795 aa17.7■□□□□ 0.42
VRK1-201ENST00000216639 NYNRINQ9P2P1 1898 aaKnown RBP17.7■□□□□ 0.42
VRK1-201ENST00000216639 COCHO43405 550 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 PEX11BO96011 259 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 OAS1P00973 400 aaKnown RBP17.69■□□□□ 0.42
VRK1-201ENST00000216639 TPH1P17752 444 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 EPHB3P54753 998 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 CORO7P57737 925 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 ITKQ08881 620 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 PLD1Q13393 1074 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 POTEHQ6S545 545 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 NDUFAF2Q8N183 169 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 PPHLN1Q8NEY8 458 aaKnown RBP17.69■□□□□ 0.42
VRK1-201ENST00000216639 PTCD2Q8WV60 388 aaKnown RBP17.69■□□□□ 0.42
VRK1-201ENST00000216639 ZNF75CPQ92670 426 aaPredicted RBP17.69■□□□□ 0.42
VRK1-201ENST00000216639 ATP2A3Q93084 1043 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 FAM111AQ96PZ2 611 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 CHRAC1Q9NRG0 131 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 VPS45Q9NRW7 570 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 NSMCE4AQ9NXX6 385 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 ZNF212Q9UDV6 495 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 ARL2BPQ9Y2Y0 163 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 DOCK4Q8N1I0 1966 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 ZCWPW2A0A1B0GU75 182 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 J3KR12 359 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 PMPCBO75439 489 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 GJB5O95377 273 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 DHRS4L1P0CG22 281 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 NEFHP12036 1026 aa17.69■□□□□ 0.42
VRK1-201ENST00000216639 ITGB8P26012 769 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms