RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 ETS1P14921 441 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 PTPN3P26045 913 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 MZF1P28698 734 aaPredicted RBP16.92■□□□□ 0.3
POLR2E-201ENST00000215587 GDI1P31150 447 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 RPL22P35268 128 aaKnown RBP16.92■□□□□ 0.3
POLR2E-201ENST00000215587 RENBPP51606 427 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 WASHC5Q12768 1159 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 LMAN2Q12907 356 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 NAA30Q147X3 362 aaPredicted RBP16.92■□□□□ 0.3
POLR2E-201ENST00000215587 ANKRD20A2Q5SQ80 823 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 TMCO4Q5TGY1 634 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 ANKRD20A1Q5TYW2 823 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 ANKRD20A3Q5VUR7 823 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 ITPRIPL1Q6GPH6 555 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 PRUNE1Q86TP1 453 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 BBOF1Q8ND07 529 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 CCDC110Q8TBZ0 833 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 SNF8Q96H20 258 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 ACE2Q9BYF1 805 aaPredicted RBP16.92■□□□□ 0.3
POLR2E-201ENST00000215587 EPC1Q9H2F5 836 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 ECT2Q9H8V3 914 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 HPS4Q9NQG7 708 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 HAUS2Q9NVX0 235 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 GGA2Q9UJY4 613 aa16.92■□□□□ 0.3
POLR2E-201ENST00000215587 KIF26AQ9ULI4 1882 aaPredicted RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 PRR33A8MZF0 331 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 PABPC1P11940 636 aaKnown RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 NRLP54845 237 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 DRG2P55039 364 aaKnown RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 GEMIN4P57678 1058 aaKnown RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 ZBTB17Q13105 803 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 CALCOCO2Q13137 446 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 CUL1Q13616 776 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 RUNX3Q13761 415 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 HNRNPDQ14103 355 aaKnown RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 DMC1Q14565 340 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 SMAD2Q15796 467 aaKnown RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 TEX44Q53QW1 395 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 MARC1Q5VT66 337 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 PTCRAQ6ISU1 281 aaPredicted RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 PID1Q7Z2X4 250 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 ZNF567Q8N184 647 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 BBS5Q8N3I7 341 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 NAT16Q8N8M0 369 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 USP33Q8TEY7 942 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 MAML1Q92585 1016 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 HINFPQ9BQA5 517 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 CEP41Q9BYV8 373 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 BRD9Q9H8M2 597 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 GDF3Q9NR23 364 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 DNAJC17Q9NVM6 304 aaKnown RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 UBA2Q9UBT2 640 aaPredicted RBP16.91■□□□□ 0.3
POLR2E-201ENST00000215587 CLEC4EQ9ULY5 219 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 SNX24Q9Y343 169 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 OR51B4Q9Y5P0 310 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 DOCK8Q8NF50 2099 aa16.91■□□□□ 0.3
POLR2E-201ENST00000215587 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.9■□□□□ 0.3
POLR2E-201ENST00000215587 ESYT3A0FGR9 886 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 BHMG1C9JSJ3 638 aaPredicted RBP16.9■□□□□ 0.3
POLR2E-201ENST00000215587 CD70P32970 193 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 FDFT1P37268 417 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 MMP13P45452 471 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 RPL21P46778 160 aaKnown RBP16.9■□□□□ 0.3
POLR2E-201ENST00000215587 DGKGP49619 791 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 PLK1P53350 603 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 BASP1P80723 227 aaKnown RBP16.9■□□□□ 0.3
POLR2E-201ENST00000215587 TNK2Q07912 1038 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 HLTFQ14527 1009 aaKnown RBP eCLIP16.9■□□□□ 0.3
POLR2E-201ENST00000215587 ZNF235Q14590 738 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 RFTN1Q14699 578 aaPredicted RBP16.9■□□□□ 0.3
POLR2E-201ENST00000215587 KCTD19Q17RG1 926 aaPredicted RBP16.9■□□□□ 0.3
POLR2E-201ENST00000215587 PLEKHG6Q3KR16 790 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 ITPRIPL2Q3MIP1 535 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 PITRM1Q5JRX3 1037 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 IZUMO3Q5VZ72 239 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 WDR93Q6P2C0 686 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 APCDD1Q8J025 514 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.9■□□□□ 0.37e-7■■□□□ 13.2
POLR2E-201ENST00000215587 WFIKKN2Q8TEU8 576 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 CASKIN2Q8WXE0 1202 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 IFT81Q8WYA0 676 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 SEC14L1Q92503 715 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 ACDQ96AP0 544 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 ALG14Q96F25 216 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 PNKPQ96T60 521 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 IL12RB2Q99665 862 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 PARD6BQ9BYG5 372 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 FAM129AQ9BZQ8 928 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 PDFQ9HBH1 243 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 RAB6BQ9NRW1 208 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 RBM22Q9NW64 420 aaKnown RBP eCLIP16.9■□□□□ 0.3
POLR2E-201ENST00000215587 WHRNQ9P202 907 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 RSPH14Q9UHP6 348 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 VPS51Q9UID3 782 aa16.9■□□□□ 0.3
POLR2E-201ENST00000215587 NYNRINQ9P2P1 1898 aaKnown RBP16.89■□□□□ 0.29
POLR2E-201ENST00000215587 DNALI1O14645 258 aaPredicted RBP16.89■□□□□ 0.29
POLR2E-201ENST00000215587 SNAP91O60641 907 aa16.89■□□□□ 0.29
POLR2E-201ENST00000215587 SEC31AO94979 1220 aaKnown RBP16.89■□□□□ 0.29
POLR2E-201ENST00000215587 ITIH2P19823 946 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms