RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MPP3Q13368 585 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 OLIG2Q13516 323 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 PACS1Q6VY07 963 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 NECAB2Q7Z6G3 386 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 TFAP2DQ7Z6R9 452 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 CHSY1Q86X52 802 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 PTCD2Q8WV60 388 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 RPRD1AQ96P16 312 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 FCRL3Q96P31 734 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 ELAC2Q9BQ52 826 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 TBL1YQ9BQ87 522 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 CYP4F11Q9HBI6 524 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 VPS45Q9NRW7 570 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 NYNRINQ9P2P1 1898 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 RRP15Q9Y3B9 282 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 F5H5T6 163 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 GOLGA8RI6L899 631 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 COCHO43405 550 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 RAMP2O60895 175 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 LILRB3O75022 631 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 HMBSP08397 361 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 RAG1P15918 1043 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 HARS2P49590 506 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 KCNQ1P51787 676 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 SERINC3Q13530 473 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 VEPH1Q14D04 833 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 CERCAMQ5T4B2 595 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 DENND5AQ6IQ26 1287 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 UNC5BQ8IZJ1 945 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 SPATA22Q8NHS9 363 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 IMP4Q96G21 291 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 KLF6Q99612 283 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 CPNE1Q99829 537 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 RXFP1Q9HBX9 757 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 ARNT2Q9HBZ2 717 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 MRM3Q9HC36 420 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 SHROOM3Q8TF72 1996 aa14.57□□□□□ -0.08
RTFDC1-201ENST00000023939 COPEO14579 308 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 ADRA1DP25100 572 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 GP5P40197 560 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 CORO7P57737 925 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 POLD3Q15054 466 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 SEPT7Q16181 437 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 FAM133BQ5BKY9 247 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 PCID2Q5JVF3 399 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 STXBP5Q5T5C0 1151 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 GRTP1Q5TC63 336 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 MARC1Q5VT66 337 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 POTEHQ6S545 545 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 KDELC1Q6UW63 502 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 RANBP10Q6VN20 620 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 LRRC8CQ8TDW0 803 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 TADA1Q96BN2 335 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 ZNF669Q96BR6 464 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 PAIP2Q9BPZ3 127 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 PLCD4Q9BRC7 762 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 SP110Q9HB58 689 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 IL23AQ9NPF7 189 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 SLC17A7Q9P2U7 560 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 UXTQ9UBK9 157 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 STARD13Q9Y3M8 1113 aa14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 USP15Q9Y4E8 981 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-201ENST00000023939 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 KIAA0754O94854 1291 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 GJB5O95377 273 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 CRHR1P34998 444 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 IFT88Q13099 833 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 FAM117BQ6P1L5 589 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 PKN3Q6P5Z2 889 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 TMCO2Q7Z6W1 182 aaPredicted RBP14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 RASSF3Q86WH2 238 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 NSMCE1Q8WV22 266 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 ZNF75CPQ92670 426 aaPredicted RBP14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 ISL2Q96A47 359 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 MRGPRX2Q96LB1 330 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 ZNF599Q96NL3 588 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 SRPK1Q96SB4 655 aaKnown RBP14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 APOL2Q9BQE5 337 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 KLF16Q9BXK1 252 aaPredicted RBP14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 NACA2Q9H009 215 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 ATP13A1Q9HD20 1204 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 MRPL17Q9NRX2 175 aaKnown RBP14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 UBP1Q9NZI7 540 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 ZFATQ9P243 1243 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 PRKAG3Q9UGI9 489 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 STOML2Q9UJZ1 356 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 SSX2IPQ9Y2D8 614 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 PLLPQ9Y342 182 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 J3KR12 359 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 PRAMEF11O60813 436 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 EDF1O60869 148 aaKnown RBP14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 NEBLO76041 1014 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 STC2O76061 302 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 LATS1O95835 1130 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 MT-CYBP00156 380 aaPredicted RBP14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 OR1E1P30953 314 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 SLC6A4P31645 630 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 ELF1P32519 619 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 EPHB3P54753 998 aa14.55□□□□□ -0.08
RTFDC1-201ENST00000023939 CDH4P55283 916 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms