RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RIMS3Q9UJD0 308 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 PTPRFP10586 1907 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 MATN2O00339 956 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 DDNO94850 711 aaPredicted RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 INSRRP14616 1297 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 TFEBP19484 476 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 DPP6P42658 865 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 ZNF280AP59817 542 aaPredicted RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 ITGA7Q13683 1181 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 PIGGQ5H8A4 983 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 SLC26A9Q7LBE3 791 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 CCNYL1Q8N7R7 359 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 SMYD1Q8NB12 490 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 ZFRQ96KR1 1074 aaKnown RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 SMARCAD1Q9H4L7 1026 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 UBP1Q9NZI7 540 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 BCAP29Q9UHQ4 241 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 TLK1Q9UKI8 766 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 RAP2CQ9Y3L5 183 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 PARP14Q460N5 1801 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 ZNF487B1APH4 448 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 H3BSA7 217 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 NDUFB5O43674 189 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 MPOP05164 745 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 JUNP05412 331 aaKnown RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 PPARGP37231 505 aaPredicted RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 GJC2Q5T442 439 aaPredicted RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 ZFP1Q6P2D0 407 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 LBX2Q6XYB7 198 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 KCNMB4Q86W47 210 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 TTC39CQ8N584 583 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 CATSPER1Q8NEC5 780 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 ADCY4Q8NFM4 1077 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 PDCD6IPQ8WUM4 868 aaKnown RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 CENPIQ92674 756 aaPredicted RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 EME1Q96AY2 570 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 VPS39Q96JC1 886 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 EIF2B3Q9NR50 452 aaKnown RBP10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 OXSMQ9NWU1 459 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 HSFX1Q9UBD0 423 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 ADAM28Q9UKQ2 775 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 CDYLQ9Y232 598 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 GMEB1Q9Y692 573 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 USP3Q9Y6I4 520 aa10.7□□□□□ -0.7
CX3CL1-201ENST00000006053 STRNO43815 780 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 CSPG5O95196 566 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 TXNP10599 105 aaKnown RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 FGFR3P22607 806 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 PCSK6P29122 969 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 COG7P83436 770 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 PLOD1Q02809 727 aaPredicted RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 BTG3Q14201 252 aaPredicted RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 Q3C1V9 767 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 TMEM259Q4ZIN3 620 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 ZDHHC17Q8IUH5 632 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 AHI1Q8N157 1196 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 SPATA6LQ8N4H0 392 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 PCDH20Q8N6Y1 951 aaKnown RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 KBTBD7Q8WVZ9 684 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 KLHL32Q96NJ5 620 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 SPATC1LQ9H0A9 340 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 CHRAC1Q9NRG0 131 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 FZD10Q9ULW2 581 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 SH3GLB1Q9Y371 365 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 LCTP09848 1927 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 C22orf31O95567 290 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 CCDC166P0CW27 439 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 LMO2P25791 158 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 BST2Q10589 180 aaKnown RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 USP10Q14694 798 aaKnown RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 GRM3Q14832 879 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 PGAM4Q8N0Y7 254 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 ATP6V1E2Q96A05 226 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 C18orf25Q96B23 403 aaPredicted RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 KLRG1Q96E93 195 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 C11orf84Q9BUA3 381 aaPredicted RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 EFCAB1Q9HAE3 211 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 PDGFCQ9NRA1 345 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 ARHGEF38Q9NXL2 777 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 RUVBL2Q9Y230 463 aaKnown RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 ARHGAP10A1A4S6 786 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 TMEM233B4DJY2 109 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 NFKBIEO00221 500 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 XPO1O14980 1071 aaKnown RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 RNASEH2AO75792 299 aaKnown RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 PSMC3P17980 439 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 GPR162Q16538 588 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 GADL1Q6ZQY3 521 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 RIOX2Q8IUF8 465 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 PSTKQ8IV42 348 aaKnown RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 TRIML2Q8N7C3 387 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 SLC2A14Q8TDB8 520 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 KCTD4Q8WVF5 259 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 SGF29Q96ES7 293 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 SENP6Q9GZR1 1112 aaPredicted RBP10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 SNTG2Q9NY99 539 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 DMTF1Q9Y222 760 aa10.69□□□□□ -0.7
CX3CL1-201ENST00000006053 ZCWPW2A0A1B0GU75 182 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms