RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Znf521Q6KAS7 1311 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ect2lA0A140LIP2 953 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm17555F6U8B9 371 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Pcdh9F8VPK8 1237 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gstt2Q61133 244 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Map4k2Q61161 821 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Med22Q62276 200 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zbtb24Q80X44 710 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 IntS13Q8QZV7 732 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ttc39cQ8VE09 580 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Olfr541Q8VGM0 312 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Piwil1Q9JMB7 862 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Skp1Q9WTX5 163 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Hecw2Q6I6G8 1578 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Prrg1A2BFE8 218 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 MtrA6H5Y3 1253 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zfp945E9PYM8 794 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ube3cQ80U95 1083 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Pde2aQ922S4 916 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ern1Q9EQY0 977 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Akap3O88987 864 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Morf4l1P60762 362 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Npr2Q6VVW5 1047 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Sult1c1Q80VR3 304 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Las2Q8CB14 526 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rdh13Q8CEE7 334 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tab1Q8CF89 502 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Q922M7 232 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cby3Q9CVN6 235 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 PlekQ9JHK5 350 aaKnown RBP14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Smad9Q9JIW5 430 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 DguokQ9QX60 277 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ifi202Q9R002 445 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gcnt3Q5JCT0 437 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Clhc1Q5M6W3 596 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm2163Q6PCY5 473 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Nat14Q8BVG8 206 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Eno2P17183 434 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cbx3P23198 183 aaKnown RBP14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Camk2bP28652 542 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 ThrbP37242 461 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Podnl1Q6P3Y9 559 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Raver2Q7TPD6 673 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Oscp1Q8BHW2 379 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Kctd2Q8CEZ0 266 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Necab2Q91ZP9 389 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rwdd2bQ99M03 290 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Prl8a6Q9DAY2 240 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zfp984A2A7A2 547 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm13088A2AGW6 460 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm8126E9Q1N7 198 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Prdx3P20108 257 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Dlg4Q62108 724 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tmem260Q8BMD6 703 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Thop1Q8C1A5 687 aaKnown RBP14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mterf3Q8R3J4 412 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Dlg2Q91XM9 852 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Trpm5Q9JJH7 1158 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup10A2BIN1 180 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup14A2CEK7 180 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup19A9C497 187 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup15A9R9W0 180 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup17B5X0G2 180 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup8E9PVW0 235 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Vmn2r50E9PW61 861 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zfp780bE9Q2S6 806 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup7E9QA79 235 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rfpl4bJ3QPR6 266 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Vmn2r39L7N2E5 861 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup6P02762 180 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup1P11588 180 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mup2P11589 180 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mrm3Q5ND52 418 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Fbxw2Q60584 422 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mrps7Q80X85 242 aaKnown RBP14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 TfQ921I1 697 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tlcd1Q99JT6 247 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cldn3Q9Z0G9 219 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tbc1d25A1A5B6 742 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm3095E9Q058 166 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cdkl4Q3TZA2 342 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Trim40Q3UWA4 246 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ntrk3Q6VNS1 825 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tas2r134Q7TQB0 298 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Asb6Q91ZU1 418 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cog2Q921L5 731 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Josd2Q9CR30 188 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tspan3Q9QY33 253 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Trim3Q9R1R2 744 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mybpc1D3YU50 1127 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rgs9O54828 675 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Scn2bQ56A07 215 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 P4ha2Q60716 537 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Fam126aQ6P9N1 521 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Spon2Q8BMS2 330 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Vnn3Q9QZ25 500 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 XdhQ00519 1335 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Fgfr1P16092 822 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 CtskP55097 329 aa14.12□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Stfa2l1Q8BWM3 103 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms